Gene : Phvul.006G014400 P. vulgaris v2.1
Defline:  (1 of 1) PF11347 - Protein of unknown function (DUF3148) (DUF3148) Genomic Order:  122
Name:  ? Phvul.006G014400 Secondary Identifier:  ? PAC:37171950
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G014400 0.5kb upstream 0.5kb upstream 2012 true Chr06: 6648384-6650395 Phaseolus vulgaris
Phvul.006G014400 0.5kb upstream 0.5kb upstream 500 false Chr06: 6648384-6648883 Phaseolus vulgaris
Phvul.006G014400 0.5kb downstream 0.5kb downstream 2012 true Chr06: 6648884-6650895 Phaseolus vulgaris
Phvul.006G014400 0.5kb downstream 0.5kb downstream 500 false Chr06: 6650396-6650895 Phaseolus vulgaris
Phvul.006G014400 1.0kb upstream 1.0kb upstream 2512 true Chr06: 6647884-6650395 Phaseolus vulgaris
Phvul.006G014400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 6647884-6648883 Phaseolus vulgaris
Phvul.006G014400 1.0kb downstream 1.0kb downstream 2512 true Chr06: 6648884-6651395 Phaseolus vulgaris
Phvul.006G014400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 6650396-6651395 Phaseolus vulgaris
Phvul.006G014400 2.0kb upstream 2.0kb upstream 3512 true Chr06: 6646884-6650395 Phaseolus vulgaris
Phvul.006G014400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 6646884-6648883 Phaseolus vulgaris
Phvul.006G014400 2.0kb downstream 2.0kb downstream 3512 true Chr06: 6648884-6652395 Phaseolus vulgaris
Phvul.006G014400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 6650396-6652395 Phaseolus vulgaris
Phvul.006G014400 5.0kb upstream 5.0kb upstream 6512 true Chr06: 6643884-6650395 Phaseolus vulgaris
Phvul.006G014400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 6643884-6648883 Phaseolus vulgaris
Phvul.006G014400 5.0kb downstream 5.0kb downstream 6512 true Chr06: 6648884-6655395 Phaseolus vulgaris
Phvul.006G014400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 6650396-6655395 Phaseolus vulgaris
Phvul.006G014400 10.0kb upstream 10.0kb upstream 11512 true Chr06: 6638884-6650395 Phaseolus vulgaris
Phvul.006G014400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 6638884-6648883 Phaseolus vulgaris
Phvul.006G014400 10.0kb downstream 10.0kb downstream 11512 true Chr06: 6648884-6660395 Phaseolus vulgaris
Phvul.006G014400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 6650396-6660395 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300714 5265 Fabidae View MSA
124063513 5270 Rosid View MSA
123741843 5271 Pentapetalae View MSA
122795737 5272 Eudicot View MSA
122044636 5273 Angiosperm View MSA
121348938 5274 Embryophyte View MSA
123381087 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.4099 0.0 41.3095    
cufflinks 13.6271 0.0 41.7626    
cufflinks 229.338 0.0 603.911 High High
cufflinks 9.58977 0.0 30.7486    
cufflinks 8.37337 0.0 27.4689    
cufflinks 84.8819 0.0 220.932 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0742664 0.0 0.376029 Low Low
cufflinks 0.225726 0.0 1.01994 Low Low
cufflinks 11.0461 0.0 34.8943    
cufflinks 6.49435 0.0 21.7539    

0 Strain