Gene : Phvul.006G013400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23153//PTHR23153:SF36 - UBX-RELATED // SUBFAMILY NOT NAMED Genomic Order:  103
Name:  ? Phvul.006G013400 Secondary Identifier:  ? PAC:37173040
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G013400 0.5kb upstream 0.5kb upstream 13956 true Chr06: 5563763-5577718 Phaseolus vulgaris
Phvul.006G013400 0.5kb upstream 0.5kb upstream 500 false Chr06: 5577219-5577718 Phaseolus vulgaris
Phvul.006G013400 0.5kb downstream 0.5kb downstream 13956 true Chr06: 5563263-5577218 Phaseolus vulgaris
Phvul.006G013400 0.5kb downstream 0.5kb downstream 500 false Chr06: 5563263-5563762 Phaseolus vulgaris
Phvul.006G013400 1.0kb upstream 1.0kb upstream 14456 true Chr06: 5563763-5578218 Phaseolus vulgaris
Phvul.006G013400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 5577219-5578218 Phaseolus vulgaris
Phvul.006G013400 1.0kb downstream 1.0kb downstream 14456 true Chr06: 5562763-5577218 Phaseolus vulgaris
Phvul.006G013400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 5562763-5563762 Phaseolus vulgaris
Phvul.006G013400 2.0kb upstream 2.0kb upstream 15456 true Chr06: 5563763-5579218 Phaseolus vulgaris
Phvul.006G013400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 5577219-5579218 Phaseolus vulgaris
Phvul.006G013400 2.0kb downstream 2.0kb downstream 15456 true Chr06: 5561763-5577218 Phaseolus vulgaris
Phvul.006G013400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 5561763-5563762 Phaseolus vulgaris
Phvul.006G013400 5.0kb upstream 5.0kb upstream 18456 true Chr06: 5563763-5582218 Phaseolus vulgaris
Phvul.006G013400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 5577219-5582218 Phaseolus vulgaris
Phvul.006G013400 5.0kb downstream 5.0kb downstream 18456 true Chr06: 5558763-5577218 Phaseolus vulgaris
Phvul.006G013400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 5558763-5563762 Phaseolus vulgaris
Phvul.006G013400 10.0kb upstream 10.0kb upstream 23456 true Chr06: 5563763-5587218 Phaseolus vulgaris
Phvul.006G013400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 5577219-5587218 Phaseolus vulgaris
Phvul.006G013400 10.0kb downstream 10.0kb downstream 23456 true Chr06: 5553763-5577218 Phaseolus vulgaris
Phvul.006G013400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 5553763-5563762 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312339 5265 Fabidae View MSA
124067856 5270 Rosid View MSA
123736685 5271 Pentapetalae View MSA
122769874 5272 Eudicot View MSA
122045997 5273 Angiosperm View MSA
121345649 5274 Embryophyte View MSA
123425530 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.3987 0.0 85.0261    
cufflinks 14.9948 0.0 48.6408    
cufflinks 22.5197 0.0 71.7688    
cufflinks 16.0329 0.0 51.9509    
cufflinks 13.6759 0.0 45.3119   Low
cufflinks 17.236 0.0 57.36    
cufflinks 28.1313 0.0 90.029 High High
cufflinks 20.4654 0.0 65.287    
cufflinks 31.5841 0.0 101.36 High High
cufflinks 18.3548 0.0 58.8217    
cufflinks 15.3004 0.0 49.9976    

0 Strain