Gene : Phvul.010G069000 P. vulgaris v2.1
Defline:  (1 of 1) K02724 - photosystem II PsbZ protein (psbZ) Genomic Order:  823
Name:  ? Phvul.010G069000 Secondary Identifier:  ? PAC:37144277
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G069000 0.5kb upstream 0.5kb upstream 1187 true Chr10: 30128711-30129897 Phaseolus vulgaris
Phvul.010G069000 0.5kb upstream 0.5kb upstream 500 false Chr10: 30129398-30129897 Phaseolus vulgaris
Phvul.010G069000 0.5kb downstream 0.5kb downstream 1187 true Chr10: 30128211-30129397 Phaseolus vulgaris
Phvul.010G069000 0.5kb downstream 0.5kb downstream 500 false Chr10: 30128211-30128710 Phaseolus vulgaris
Phvul.010G069000 1.0kb upstream 1.0kb upstream 1687 true Chr10: 30128711-30130397 Phaseolus vulgaris
Phvul.010G069000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 30129398-30130397 Phaseolus vulgaris
Phvul.010G069000 1.0kb downstream 1.0kb downstream 1687 true Chr10: 30127711-30129397 Phaseolus vulgaris
Phvul.010G069000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 30127711-30128710 Phaseolus vulgaris
Phvul.010G069000 2.0kb upstream 2.0kb upstream 2687 true Chr10: 30128711-30131397 Phaseolus vulgaris
Phvul.010G069000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 30129398-30131397 Phaseolus vulgaris
Phvul.010G069000 2.0kb downstream 2.0kb downstream 2687 true Chr10: 30126711-30129397 Phaseolus vulgaris
Phvul.010G069000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 30126711-30128710 Phaseolus vulgaris
Phvul.010G069000 5.0kb upstream 5.0kb upstream 5687 true Chr10: 30128711-30134397 Phaseolus vulgaris
Phvul.010G069000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 30129398-30134397 Phaseolus vulgaris
Phvul.010G069000 5.0kb downstream 5.0kb downstream 5687 true Chr10: 30123711-30129397 Phaseolus vulgaris
Phvul.010G069000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 30123711-30128710 Phaseolus vulgaris
Phvul.010G069000 10.0kb upstream 10.0kb upstream 10687 true Chr10: 30128711-30139397 Phaseolus vulgaris
Phvul.010G069000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 30129398-30139397 Phaseolus vulgaris
Phvul.010G069000 10.0kb downstream 10.0kb downstream 10687 true Chr10: 30118711-30129397 Phaseolus vulgaris
Phvul.010G069000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 30118711-30128710 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028507 5273 Angiosperm View MSA
122313261 5265 Fabidae View MSA
124050197 5270 Rosid View MSA
123752030 5271 Pentapetalae View MSA
122774318 5272 Eudicot View MSA
121349923 5274 Embryophyte View MSA
123381503 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.815873 0.0 3.30584    
cufflinks 0.211626 0.0 0.981058 Low  
cufflinks 17.0547 0.0 51.7819   High
cufflinks 1.88556 0.0 7.28809    
cufflinks 0.816988 0.0 3.36235    
cufflinks 5.91804 0.0 20.3802   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0834547 0.0 0.422551 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.74769 0.0 10.1726    
cufflinks 0.123282 0.0 0.611609 Low Low

0 Strain