Gene : Phvul.006G015500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10887//PTHR10887:SF372 - DNA2/NAM7 HELICASE FAMILY // SUBFAMILY NOT NAMED Genomic Order:  135
Name:  ? Phvul.006G015500 Secondary Identifier:  ? PAC:37173734
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G015500 0.5kb upstream 0.5kb upstream 7244 true Chr06: 7063408-7070651 Phaseolus vulgaris
Phvul.006G015500 0.5kb upstream 0.5kb upstream 500 false Chr06: 7070152-7070651 Phaseolus vulgaris
Phvul.006G015500 0.5kb downstream 0.5kb downstream 7244 true Chr06: 7062908-7070151 Phaseolus vulgaris
Phvul.006G015500 0.5kb downstream 0.5kb downstream 500 false Chr06: 7062908-7063407 Phaseolus vulgaris
Phvul.006G015500 1.0kb upstream 1.0kb upstream 7744 true Chr06: 7063408-7071151 Phaseolus vulgaris
Phvul.006G015500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 7070152-7071151 Phaseolus vulgaris
Phvul.006G015500 1.0kb downstream 1.0kb downstream 7744 true Chr06: 7062408-7070151 Phaseolus vulgaris
Phvul.006G015500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 7062408-7063407 Phaseolus vulgaris
Phvul.006G015500 2.0kb upstream 2.0kb upstream 8744 true Chr06: 7063408-7072151 Phaseolus vulgaris
Phvul.006G015500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 7070152-7072151 Phaseolus vulgaris
Phvul.006G015500 2.0kb downstream 2.0kb downstream 8744 true Chr06: 7061408-7070151 Phaseolus vulgaris
Phvul.006G015500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 7061408-7063407 Phaseolus vulgaris
Phvul.006G015500 5.0kb upstream 5.0kb upstream 11744 true Chr06: 7063408-7075151 Phaseolus vulgaris
Phvul.006G015500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 7070152-7075151 Phaseolus vulgaris
Phvul.006G015500 5.0kb downstream 5.0kb downstream 11744 true Chr06: 7058408-7070151 Phaseolus vulgaris
Phvul.006G015500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 7058408-7063407 Phaseolus vulgaris
Phvul.006G015500 10.0kb upstream 10.0kb upstream 16744 true Chr06: 7063408-7080151 Phaseolus vulgaris
Phvul.006G015500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 7070152-7080151 Phaseolus vulgaris
Phvul.006G015500 10.0kb downstream 10.0kb downstream 16744 true Chr06: 7053408-7070151 Phaseolus vulgaris
Phvul.006G015500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 7053408-7063407 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313084 5265 Fabidae View MSA
124072227 5270 Rosid View MSA
123753543 5271 Pentapetalae View MSA
122797869 5272 Eudicot View MSA
122048393 5273 Angiosperm View MSA
123429092 5275 Viridiplantae View MSA
121348032 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0138271 0.0 0.0640996 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00937105 0.0 0.0451826 Low  
cufflinks 0.0165227 0.0 0.0752276 Low  
cufflinks 0.0397036 0.0 0.165193 Low High
cufflinks 0.0092797 0.0 0.045073 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.039605 0.0 0.167012 Low High

0 Strain