Gene : Phvul.006G015700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10015//PTHR10015:SF177 - HEAT SHOCK TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Genomic Order:  137
Name:  ? Phvul.006G015700 Secondary Identifier:  ? PAC:37171448
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G015700 0.5kb upstream 0.5kb upstream 1956 true Chr06: 7139260-7141215 Phaseolus vulgaris
Phvul.006G015700 0.5kb upstream 0.5kb upstream 500 false Chr06: 7139260-7139759 Phaseolus vulgaris
Phvul.006G015700 0.5kb downstream 0.5kb downstream 1956 true Chr06: 7139760-7141715 Phaseolus vulgaris
Phvul.006G015700 0.5kb downstream 0.5kb downstream 500 false Chr06: 7141216-7141715 Phaseolus vulgaris
Phvul.006G015700 1.0kb upstream 1.0kb upstream 2456 true Chr06: 7138760-7141215 Phaseolus vulgaris
Phvul.006G015700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 7138760-7139759 Phaseolus vulgaris
Phvul.006G015700 1.0kb downstream 1.0kb downstream 2456 true Chr06: 7139760-7142215 Phaseolus vulgaris
Phvul.006G015700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 7141216-7142215 Phaseolus vulgaris
Phvul.006G015700 2.0kb upstream 2.0kb upstream 3456 true Chr06: 7137760-7141215 Phaseolus vulgaris
Phvul.006G015700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 7137760-7139759 Phaseolus vulgaris
Phvul.006G015700 2.0kb downstream 2.0kb downstream 3456 true Chr06: 7139760-7143215 Phaseolus vulgaris
Phvul.006G015700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 7141216-7143215 Phaseolus vulgaris
Phvul.006G015700 5.0kb upstream 5.0kb upstream 6456 true Chr06: 7134760-7141215 Phaseolus vulgaris
Phvul.006G015700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 7134760-7139759 Phaseolus vulgaris
Phvul.006G015700 5.0kb downstream 5.0kb downstream 6456 true Chr06: 7139760-7146215 Phaseolus vulgaris
Phvul.006G015700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 7141216-7146215 Phaseolus vulgaris
Phvul.006G015700 10.0kb upstream 10.0kb upstream 11456 true Chr06: 7129760-7141215 Phaseolus vulgaris
Phvul.006G015700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 7129760-7139759 Phaseolus vulgaris
Phvul.006G015700 10.0kb downstream 10.0kb downstream 11456 true Chr06: 7139760-7151215 Phaseolus vulgaris
Phvul.006G015700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 7141216-7151215 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254177 5265 Fabidae View MSA
124070016 5270 Rosid View MSA
123749561 5271 Pentapetalae View MSA
122794562 5272 Eudicot View MSA
122050286 5273 Angiosperm View MSA
121349623 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0930831 0.0 0.428451 Low Low
cufflinks 1.06345 0.0 3.95889    
cufflinks 0.664398 0.0 2.55501    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.02463 0.0 10.2156   High
cufflinks 0.116005 0.0 0.52063 Low Low
cufflinks 1.56338 0.0 5.62191    
cufflinks 1.34226 0.0 4.8803    
cufflinks 1.46709 0.0 5.30619    
cufflinks 0.0734402 0.0 0.346967 Low Low
cufflinks 2.84934 0.0 9.68121   High

0 Strain