Gene : Phvul.010G070200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23336//PTHR23336:SF24 - ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. // SUBFAMILY NOT NAMED Genomic Order:  833
Name:  ? Phvul.010G070200 Secondary Identifier:  ? PAC:37142152
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G070200 0.5kb upstream 0.5kb upstream 8583 true Chr10: 30953527-30962109 Phaseolus vulgaris
Phvul.010G070200 0.5kb upstream 0.5kb upstream 500 false Chr10: 30961610-30962109 Phaseolus vulgaris
Phvul.010G070200 0.5kb downstream 0.5kb downstream 8583 true Chr10: 30953027-30961609 Phaseolus vulgaris
Phvul.010G070200 0.5kb downstream 0.5kb downstream 500 false Chr10: 30953027-30953526 Phaseolus vulgaris
Phvul.010G070200 1.0kb upstream 1.0kb upstream 9083 true Chr10: 30953527-30962609 Phaseolus vulgaris
Phvul.010G070200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 30961610-30962609 Phaseolus vulgaris
Phvul.010G070200 1.0kb downstream 1.0kb downstream 9083 true Chr10: 30952527-30961609 Phaseolus vulgaris
Phvul.010G070200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 30952527-30953526 Phaseolus vulgaris
Phvul.010G070200 2.0kb upstream 2.0kb upstream 10083 true Chr10: 30953527-30963609 Phaseolus vulgaris
Phvul.010G070200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 30961610-30963609 Phaseolus vulgaris
Phvul.010G070200 2.0kb downstream 2.0kb downstream 10083 true Chr10: 30951527-30961609 Phaseolus vulgaris
Phvul.010G070200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 30951527-30953526 Phaseolus vulgaris
Phvul.010G070200 5.0kb upstream 5.0kb upstream 13083 true Chr10: 30953527-30966609 Phaseolus vulgaris
Phvul.010G070200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 30961610-30966609 Phaseolus vulgaris
Phvul.010G070200 5.0kb downstream 5.0kb downstream 13083 true Chr10: 30948527-30961609 Phaseolus vulgaris
Phvul.010G070200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 30948527-30953526 Phaseolus vulgaris
Phvul.010G070200 10.0kb upstream 10.0kb upstream 18083 true Chr10: 30953527-30971609 Phaseolus vulgaris
Phvul.010G070200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 30961610-30971609 Phaseolus vulgaris
Phvul.010G070200 10.0kb downstream 10.0kb downstream 18083 true Chr10: 30943527-30961609 Phaseolus vulgaris
Phvul.010G070200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 30943527-30953526 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306915 5265 Fabidae View MSA
124062028 5270 Rosid View MSA
123749673 5271 Pentapetalae View MSA
122797219 5272 Eudicot View MSA
122049123 5273 Angiosperm View MSA
121350931 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.81336 0.0 18.4138    
cufflinks 2.18183 0.0 10.0418    
cufflinks 1.93393 0.0 6.88013   Low
cufflinks 0.851706 0.0 4.53967   Low
cufflinks 7.02142 0.0 25.9353    
cufflinks 3.56059 0.0 14.4808    
cufflinks 7.70684 0.0 27.5575    
cufflinks 3.66642 0.0 14.7295    
cufflinks 8.74501 0.0 30.9731   High
cufflinks 6.71886 0.0 24.9662    
cufflinks 7.04752 0.0 25.5413    

0 Strain