Gene : Phvul.010G049100 P. vulgaris v2.1
Defline:  (1 of 3) K14795 - ribosomal RNA-processing protein 36 (RRP36) Genomic Order:  739
Name:  ? Phvul.010G049100 Secondary Identifier:  ? PAC:37143105
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G049100 0.5kb upstream 0.5kb upstream 4087 true Chr10: 23527321-23531407 Phaseolus vulgaris
Phvul.010G049100 0.5kb upstream 0.5kb upstream 500 false Chr10: 23527321-23527820 Phaseolus vulgaris
Phvul.010G049100 0.5kb downstream 0.5kb downstream 4087 true Chr10: 23527821-23531907 Phaseolus vulgaris
Phvul.010G049100 0.5kb downstream 0.5kb downstream 500 false Chr10: 23531408-23531907 Phaseolus vulgaris
Phvul.010G049100 1.0kb upstream 1.0kb upstream 4587 true Chr10: 23526821-23531407 Phaseolus vulgaris
Phvul.010G049100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 23526821-23527820 Phaseolus vulgaris
Phvul.010G049100 1.0kb downstream 1.0kb downstream 4587 true Chr10: 23527821-23532407 Phaseolus vulgaris
Phvul.010G049100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 23531408-23532407 Phaseolus vulgaris
Phvul.010G049100 2.0kb upstream 2.0kb upstream 5587 true Chr10: 23525821-23531407 Phaseolus vulgaris
Phvul.010G049100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 23525821-23527820 Phaseolus vulgaris
Phvul.010G049100 2.0kb downstream 2.0kb downstream 5587 true Chr10: 23527821-23533407 Phaseolus vulgaris
Phvul.010G049100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 23531408-23533407 Phaseolus vulgaris
Phvul.010G049100 5.0kb upstream 5.0kb upstream 8587 true Chr10: 23522821-23531407 Phaseolus vulgaris
Phvul.010G049100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 23522821-23527820 Phaseolus vulgaris
Phvul.010G049100 5.0kb downstream 5.0kb downstream 8587 true Chr10: 23527821-23536407 Phaseolus vulgaris
Phvul.010G049100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 23531408-23536407 Phaseolus vulgaris
Phvul.010G049100 10.0kb upstream 10.0kb upstream 13587 true Chr10: 23517821-23531407 Phaseolus vulgaris
Phvul.010G049100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 23517821-23527820 Phaseolus vulgaris
Phvul.010G049100 10.0kb downstream 10.0kb downstream 13587 true Chr10: 23527821-23541407 Phaseolus vulgaris
Phvul.010G049100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 23531408-23541407 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306415 5265 Fabidae View MSA
124065033 5270 Rosid View MSA
123748708 5271 Pentapetalae View MSA
122790262 5272 Eudicot View MSA
122043218 5273 Angiosperm View MSA
121347730 5274 Embryophyte View MSA
123428667 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.5125 0.0 41.5427   High
cufflinks 8.28532 0.0 30.1126    
cufflinks 8.23757 0.0 27.1973    
cufflinks 7.85107 0.0 26.8616    
cufflinks 5.41926 0.0 20.3958   Low
cufflinks 6.30323 0.0 22.0561    
cufflinks 8.43463 0.0 27.5934    
cufflinks 10.0245 0.0 33.8726    
cufflinks 7.00523 0.0 23.9364    
cufflinks 9.39628 0.0 32.8323    
cufflinks 6.19169 0.0 22.1715   Low

0 Strain