Gene : Phvul.010G052900 P. vulgaris v2.1
Defline:  (1 of 36) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  511
Name:  ? Phvul.010G052900 Secondary Identifier:  ? PAC:37143077
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G052900 0.5kb upstream 0.5kb upstream 3717 true Chr10: 8155096-8158812 Phaseolus vulgaris
Phvul.010G052900 0.5kb upstream 0.5kb upstream 500 false Chr10: 8155096-8155595 Phaseolus vulgaris
Phvul.010G052900 0.5kb downstream 0.5kb downstream 3717 true Chr10: 8155596-8159312 Phaseolus vulgaris
Phvul.010G052900 0.5kb downstream 0.5kb downstream 500 false Chr10: 8158813-8159312 Phaseolus vulgaris
Phvul.010G052900 1.0kb upstream 1.0kb upstream 4217 true Chr10: 8154596-8158812 Phaseolus vulgaris
Phvul.010G052900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 8154596-8155595 Phaseolus vulgaris
Phvul.010G052900 1.0kb downstream 1.0kb downstream 4217 true Chr10: 8155596-8159812 Phaseolus vulgaris
Phvul.010G052900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 8158813-8159812 Phaseolus vulgaris
Phvul.010G052900 2.0kb upstream 2.0kb upstream 5217 true Chr10: 8153596-8158812 Phaseolus vulgaris
Phvul.010G052900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 8153596-8155595 Phaseolus vulgaris
Phvul.010G052900 2.0kb downstream 2.0kb downstream 5217 true Chr10: 8155596-8160812 Phaseolus vulgaris
Phvul.010G052900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 8158813-8160812 Phaseolus vulgaris
Phvul.010G052900 5.0kb upstream 5.0kb upstream 8217 true Chr10: 8150596-8158812 Phaseolus vulgaris
Phvul.010G052900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 8150596-8155595 Phaseolus vulgaris
Phvul.010G052900 5.0kb downstream 5.0kb downstream 8217 true Chr10: 8155596-8163812 Phaseolus vulgaris
Phvul.010G052900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 8158813-8163812 Phaseolus vulgaris
Phvul.010G052900 10.0kb upstream 10.0kb upstream 13217 true Chr10: 8145596-8158812 Phaseolus vulgaris
Phvul.010G052900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 8145596-8155595 Phaseolus vulgaris
Phvul.010G052900 10.0kb downstream 10.0kb downstream 13217 true Chr10: 8155596-8168812 Phaseolus vulgaris
Phvul.010G052900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 8158813-8168812 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314572 5265 Fabidae View MSA
124074599 5270 Rosid View MSA
123753721 5271 Pentapetalae View MSA
122797892 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.29501 0.0 12.4326    
cufflinks 8.01134 0.0 21.8505    
cufflinks 10.2707 0.0 27.362    
cufflinks 2.03797 0.0 6.43531   Low
cufflinks 18.7257 0.0 48.5721   High
cufflinks 10.1261 0.0 27.1023    
cufflinks 4.01476 0.0 11.7009    
cufflinks 0.8753 0.0 3.02879   Low
cufflinks 2.0417 0.0 6.42078   Low
cufflinks 12.2601 0.0 32.4103    
cufflinks 25.6777 0.0 66.3733   High

0 Strain