Gene : Phvul.010G052100 P. vulgaris v2.1
Defline:  (1 of 1) K05754 - actin related protein 2/3 complex, subunit 5 (ARPC5) Genomic Order:  502
Name:  ? Phvul.010G052100 Secondary Identifier:  ? PAC:37143497
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G052100 0.5kb upstream 0.5kb upstream 4030 true Chr10: 8062394-8066423 Phaseolus vulgaris
Phvul.010G052100 0.5kb upstream 0.5kb upstream 500 false Chr10: 8062394-8062893 Phaseolus vulgaris
Phvul.010G052100 0.5kb downstream 0.5kb downstream 4030 true Chr10: 8062894-8066923 Phaseolus vulgaris
Phvul.010G052100 0.5kb downstream 0.5kb downstream 500 false Chr10: 8066424-8066923 Phaseolus vulgaris
Phvul.010G052100 1.0kb upstream 1.0kb upstream 4530 true Chr10: 8061894-8066423 Phaseolus vulgaris
Phvul.010G052100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 8061894-8062893 Phaseolus vulgaris
Phvul.010G052100 1.0kb downstream 1.0kb downstream 4530 true Chr10: 8062894-8067423 Phaseolus vulgaris
Phvul.010G052100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 8066424-8067423 Phaseolus vulgaris
Phvul.010G052100 2.0kb upstream 2.0kb upstream 5530 true Chr10: 8060894-8066423 Phaseolus vulgaris
Phvul.010G052100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 8060894-8062893 Phaseolus vulgaris
Phvul.010G052100 2.0kb downstream 2.0kb downstream 5530 true Chr10: 8062894-8068423 Phaseolus vulgaris
Phvul.010G052100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 8066424-8068423 Phaseolus vulgaris
Phvul.010G052100 5.0kb upstream 5.0kb upstream 8530 true Chr10: 8057894-8066423 Phaseolus vulgaris
Phvul.010G052100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 8057894-8062893 Phaseolus vulgaris
Phvul.010G052100 5.0kb downstream 5.0kb downstream 8530 true Chr10: 8062894-8071423 Phaseolus vulgaris
Phvul.010G052100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 8066424-8071423 Phaseolus vulgaris
Phvul.010G052100 10.0kb upstream 10.0kb upstream 13530 true Chr10: 8052894-8066423 Phaseolus vulgaris
Phvul.010G052100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 8052894-8062893 Phaseolus vulgaris
Phvul.010G052100 10.0kb downstream 10.0kb downstream 13530 true Chr10: 8062894-8076423 Phaseolus vulgaris
Phvul.010G052100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 8066424-8076423 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299008 5265 Fabidae View MSA
124065030 5270 Rosid View MSA
123743406 5271 Pentapetalae View MSA
122787915 5272 Eudicot View MSA
122045288 5273 Angiosperm View MSA
121350257 5274 Embryophyte View MSA
123381649 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.14745 0.0 25.1401    
cufflinks 7.61382 0.0 23.7216    
cufflinks 7.70726 0.0 23.9264    
cufflinks 10.767 0.0 32.4081   High
cufflinks 6.06216 0.0 19.5862    
cufflinks 8.06364 0.0 24.939    
cufflinks 5.4094 0.0 17.5247   Low
cufflinks 7.15586 0.0 22.3205    
cufflinks 6.015 0.0 19.2938    
cufflinks 4.97141 0.0 16.3071   Low
cufflinks 7.64976 0.0 23.9847    

0 Strain