Gene : Phvul.010G055600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11941:SF48 - 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 1, MITOCHONDRIAL Genomic Order:  585
Name:  ? Phvul.010G055600 Secondary Identifier:  ? PAC:37143003
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7574 Phaseolus vulgaris pathologic  
Pvulgaris VALDEG-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G055600 0.5kb upstream 0.5kb upstream 9511 true Chr10: 9905865-9915375 Phaseolus vulgaris
Phvul.010G055600 0.5kb upstream 0.5kb upstream 500 false Chr10: 9914876-9915375 Phaseolus vulgaris
Phvul.010G055600 0.5kb downstream 0.5kb downstream 9511 true Chr10: 9905365-9914875 Phaseolus vulgaris
Phvul.010G055600 0.5kb downstream 0.5kb downstream 500 false Chr10: 9905365-9905864 Phaseolus vulgaris
Phvul.010G055600 1.0kb upstream 1.0kb upstream 10011 true Chr10: 9905865-9915875 Phaseolus vulgaris
Phvul.010G055600 1.0kb upstream 1.0kb upstream 1000 false Chr10: 9914876-9915875 Phaseolus vulgaris
Phvul.010G055600 1.0kb downstream 1.0kb downstream 10011 true Chr10: 9904865-9914875 Phaseolus vulgaris
Phvul.010G055600 1.0kb downstream 1.0kb downstream 1000 false Chr10: 9904865-9905864 Phaseolus vulgaris
Phvul.010G055600 2.0kb upstream 2.0kb upstream 11011 true Chr10: 9905865-9916875 Phaseolus vulgaris
Phvul.010G055600 2.0kb upstream 2.0kb upstream 2000 false Chr10: 9914876-9916875 Phaseolus vulgaris
Phvul.010G055600 2.0kb downstream 2.0kb downstream 11011 true Chr10: 9903865-9914875 Phaseolus vulgaris
Phvul.010G055600 2.0kb downstream 2.0kb downstream 2000 false Chr10: 9903865-9905864 Phaseolus vulgaris
Phvul.010G055600 5.0kb upstream 5.0kb upstream 14011 true Chr10: 9905865-9919875 Phaseolus vulgaris
Phvul.010G055600 5.0kb upstream 5.0kb upstream 5000 false Chr10: 9914876-9919875 Phaseolus vulgaris
Phvul.010G055600 5.0kb downstream 5.0kb downstream 14011 true Chr10: 9900865-9914875 Phaseolus vulgaris
Phvul.010G055600 5.0kb downstream 5.0kb downstream 5000 false Chr10: 9900865-9905864 Phaseolus vulgaris
Phvul.010G055600 10.0kb upstream 10.0kb upstream 19011 true Chr10: 9905865-9924875 Phaseolus vulgaris
Phvul.010G055600 10.0kb upstream 10.0kb upstream 10000 false Chr10: 9914876-9924875 Phaseolus vulgaris
Phvul.010G055600 10.0kb downstream 10.0kb downstream 19011 true Chr10: 9895865-9914875 Phaseolus vulgaris
Phvul.010G055600 10.0kb downstream 10.0kb downstream 10000 false Chr10: 9895865-9905864 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304034 5265 Fabidae View MSA
124065753 5270 Rosid View MSA
123742938 5271 Pentapetalae View MSA
122794700 5272 Eudicot View MSA
122041951 5273 Angiosperm View MSA
121350478 5274 Embryophyte View MSA
123428448 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.56406 0.0 8.00887    
cufflinks 5.71067 0.0 16.2999   High
cufflinks 3.02015 0.0 9.24235    
cufflinks 5.13511 0.0 14.9238   High
cufflinks 3.24214 0.0 9.95399    
cufflinks 2.53095 0.0 7.90771    
cufflinks 2.67375 0.0 8.30412    
cufflinks 4.43768 0.0 12.9543    
cufflinks 2.04246 0.0 6.55141   Low
cufflinks 4.63509 0.0 13.5543    
cufflinks 3.66886 0.0 11.0548    

0 Strain