Gene : Phvul.006G011600 P. vulgaris v2.1
Defline:  (1 of 3) K00423 - L-ascorbate oxidase (E1.10.3.3) Genomic Order:  99
Name:  ? Phvul.006G011600 Secondary Identifier:  ? PAC:37172760
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G011600 0.5kb upstream 0.5kb upstream 6780 true Chr06: 5354625-5361404 Phaseolus vulgaris
Phvul.006G011600 0.5kb upstream 0.5kb upstream 500 false Chr06: 5360905-5361404 Phaseolus vulgaris
Phvul.006G011600 0.5kb downstream 0.5kb downstream 6780 true Chr06: 5354125-5360904 Phaseolus vulgaris
Phvul.006G011600 0.5kb downstream 0.5kb downstream 500 false Chr06: 5354125-5354624 Phaseolus vulgaris
Phvul.006G011600 1.0kb upstream 1.0kb upstream 7280 true Chr06: 5354625-5361904 Phaseolus vulgaris
Phvul.006G011600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 5360905-5361904 Phaseolus vulgaris
Phvul.006G011600 1.0kb downstream 1.0kb downstream 7280 true Chr06: 5353625-5360904 Phaseolus vulgaris
Phvul.006G011600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 5353625-5354624 Phaseolus vulgaris
Phvul.006G011600 2.0kb upstream 2.0kb upstream 8280 true Chr06: 5354625-5362904 Phaseolus vulgaris
Phvul.006G011600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 5360905-5362904 Phaseolus vulgaris
Phvul.006G011600 2.0kb downstream 2.0kb downstream 8280 true Chr06: 5352625-5360904 Phaseolus vulgaris
Phvul.006G011600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 5352625-5354624 Phaseolus vulgaris
Phvul.006G011600 5.0kb upstream 5.0kb upstream 11280 true Chr06: 5354625-5365904 Phaseolus vulgaris
Phvul.006G011600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 5360905-5365904 Phaseolus vulgaris
Phvul.006G011600 5.0kb downstream 5.0kb downstream 11280 true Chr06: 5349625-5360904 Phaseolus vulgaris
Phvul.006G011600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 5349625-5354624 Phaseolus vulgaris
Phvul.006G011600 10.0kb upstream 10.0kb upstream 16280 true Chr06: 5354625-5370904 Phaseolus vulgaris
Phvul.006G011600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 5360905-5370904 Phaseolus vulgaris
Phvul.006G011600 10.0kb downstream 10.0kb downstream 16280 true Chr06: 5344625-5360904 Phaseolus vulgaris
Phvul.006G011600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 5344625-5354624 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304662 5265 Fabidae View MSA
124063404 5270 Rosid View MSA
123739714 5271 Pentapetalae View MSA
122791263 5272 Eudicot View MSA
122042920 5273 Angiosperm View MSA
121348734 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.723072 0.0 2.55269   Low
cufflinks 1.76704 0.0 5.62897    
cufflinks 9.5105 0.0 25.4493   High
cufflinks 0.768299 0.0 2.70676   Low
cufflinks 4.1569 0.0 12.1098    
cufflinks 2.63985 0.0 8.02836    
cufflinks 6.90082 0.0 19.0169   High
cufflinks 3.49151 0.0 10.2549    
cufflinks 8.38717 0.0 22.7319   High
cufflinks 0.482574 0.0 1.76816   Low
cufflinks 2.23254 0.0 6.97467    

0 Strain