Gene : Phvul.010G058900 P. vulgaris v2.1
Genomic Order:  559 Name:  ? Phvul.010G058900
Secondary Identifier:  ? PAC:37143691
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G058900 0.5kb upstream 0.5kb upstream 3856 true Chr10: 9241306-9245161 Phaseolus vulgaris
Phvul.010G058900 0.5kb upstream 0.5kb upstream 500 false Chr10: 9241306-9241805 Phaseolus vulgaris
Phvul.010G058900 0.5kb downstream 0.5kb downstream 3856 true Chr10: 9241806-9245661 Phaseolus vulgaris
Phvul.010G058900 0.5kb downstream 0.5kb downstream 500 false Chr10: 9245162-9245661 Phaseolus vulgaris
Phvul.010G058900 1.0kb upstream 1.0kb upstream 4356 true Chr10: 9240806-9245161 Phaseolus vulgaris
Phvul.010G058900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 9240806-9241805 Phaseolus vulgaris
Phvul.010G058900 1.0kb downstream 1.0kb downstream 4356 true Chr10: 9241806-9246161 Phaseolus vulgaris
Phvul.010G058900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 9245162-9246161 Phaseolus vulgaris
Phvul.010G058900 2.0kb upstream 2.0kb upstream 5356 true Chr10: 9239806-9245161 Phaseolus vulgaris
Phvul.010G058900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 9239806-9241805 Phaseolus vulgaris
Phvul.010G058900 2.0kb downstream 2.0kb downstream 5356 true Chr10: 9241806-9247161 Phaseolus vulgaris
Phvul.010G058900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 9245162-9247161 Phaseolus vulgaris
Phvul.010G058900 5.0kb upstream 5.0kb upstream 8356 true Chr10: 9236806-9245161 Phaseolus vulgaris
Phvul.010G058900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 9236806-9241805 Phaseolus vulgaris
Phvul.010G058900 5.0kb downstream 5.0kb downstream 8356 true Chr10: 9241806-9250161 Phaseolus vulgaris
Phvul.010G058900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 9245162-9250161 Phaseolus vulgaris
Phvul.010G058900 10.0kb upstream 10.0kb upstream 13356 true Chr10: 9231806-9245161 Phaseolus vulgaris
Phvul.010G058900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 9231806-9241805 Phaseolus vulgaris
Phvul.010G058900 10.0kb downstream 10.0kb downstream 13356 true Chr10: 9241806-9255161 Phaseolus vulgaris
Phvul.010G058900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 9245162-9255161 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306707 5265 Fabidae View MSA
124067762 5270 Rosid View MSA
123738724 5271 Pentapetalae View MSA
122787943 5272 Eudicot View MSA
122041887 5273 Angiosperm View MSA
121348905 5274 Embryophyte View MSA
123381070 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.0708 0.0 34.1414    
cufflinks 15.4608 0.0 42.7871    
cufflinks 11.7471 0.0 33.2948    
cufflinks 20.9945 0.0 56.547   High
cufflinks 13.9461 0.0 39.0908    
cufflinks 11.1553 0.0 31.7714    
cufflinks 11.4026 0.0 32.2398    
cufflinks 17.4956 0.0 47.6229    
cufflinks 13.6323 0.0 38.0009    
cufflinks 6.05867 0.0 18.5929   Low
cufflinks 15.1476 0.0 42.0533    

0 Strain