Gene : Phvul.005G180700 P. vulgaris v2.1
Defline:  (1 of 4) PTHR24093:SF355 - ATPASE 1, PLASMA MEMBRANE-TYPE-RELATED Genomic Order:  1706
Name:  ? Phvul.005G180700 Secondary Identifier:  ? PAC:37153023
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G180700 0.5kb upstream 0.5kb upstream 4763 true Chr05: 40575868-40580630 Phaseolus vulgaris
Phvul.005G180700 0.5kb upstream 0.5kb upstream 500 false Chr05: 40575868-40576367 Phaseolus vulgaris
Phvul.005G180700 0.5kb downstream 0.5kb downstream 4763 true Chr05: 40576368-40581130 Phaseolus vulgaris
Phvul.005G180700 0.5kb downstream 0.5kb downstream 500 false Chr05: 40580631-40581130 Phaseolus vulgaris
Phvul.005G180700 1.0kb upstream 1.0kb upstream 5263 true Chr05: 40575368-40580630 Phaseolus vulgaris
Phvul.005G180700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40575368-40576367 Phaseolus vulgaris
Phvul.005G180700 1.0kb downstream 1.0kb downstream 5263 true Chr05: 40576368-40581630 Phaseolus vulgaris
Phvul.005G180700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40580631-40581630 Phaseolus vulgaris
Phvul.005G180700 2.0kb upstream 2.0kb upstream 6263 true Chr05: 40574368-40580630 Phaseolus vulgaris
Phvul.005G180700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40574368-40576367 Phaseolus vulgaris
Phvul.005G180700 2.0kb downstream 2.0kb downstream 6263 true Chr05: 40576368-40582630 Phaseolus vulgaris
Phvul.005G180700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40580631-40582630 Phaseolus vulgaris
Phvul.005G180700 5.0kb upstream 5.0kb upstream 9263 true Chr05: 40571368-40580630 Phaseolus vulgaris
Phvul.005G180700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40571368-40576367 Phaseolus vulgaris
Phvul.005G180700 5.0kb downstream 5.0kb downstream 9263 true Chr05: 40576368-40585630 Phaseolus vulgaris
Phvul.005G180700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40580631-40585630 Phaseolus vulgaris
Phvul.005G180700 10.0kb upstream 10.0kb upstream 14263 true Chr05: 40566368-40580630 Phaseolus vulgaris
Phvul.005G180700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40566368-40576367 Phaseolus vulgaris
Phvul.005G180700 10.0kb downstream 10.0kb downstream 14263 true Chr05: 40576368-40590630 Phaseolus vulgaris
Phvul.005G180700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40580631-40590630 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304386 5265 Fabidae View MSA
124070972 5270 Rosid View MSA
123741825 5271 Pentapetalae View MSA
122796712 5272 Eudicot View MSA
122050656 5273 Angiosperm View MSA
121349531 5274 Embryophyte View MSA
123428375 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.158103 0.0 0.601191 Low  
cufflinks 0.204754 0.0 0.762232 Low  
cufflinks 0.418032 0.0 1.45239 Low  
cufflinks 5.68127 0.0 15.128   High
cufflinks 0.36619 0.0 1.29433 Low  
cufflinks 1.39941 0.0 4.24976    
cufflinks 0.325542 0.0 1.16044 Low  
cufflinks 0.209497 0.0 0.778058 Low  
cufflinks 0.566653 0.0 1.90244    
cufflinks 0.0138077 0.0 0.0652341 Low Low
cufflinks 0.662854 0.0 2.19552    

0 Strain