Gene : Phvul.010G040900 P. vulgaris v2.1
Defline:  (1 of 3) PTHR11566:SF80 - DYNAMIN-RELATED PROTEIN 1C Genomic Order:  402
Name:  ? Phvul.010G040900 Secondary Identifier:  ? PAC:37144048
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G040900 0.5kb upstream 0.5kb upstream 7939 true Chr10: 6108733-6116671 Phaseolus vulgaris
Phvul.010G040900 0.5kb upstream 0.5kb upstream 500 false Chr10: 6116172-6116671 Phaseolus vulgaris
Phvul.010G040900 0.5kb downstream 0.5kb downstream 7939 true Chr10: 6108233-6116171 Phaseolus vulgaris
Phvul.010G040900 0.5kb downstream 0.5kb downstream 500 false Chr10: 6108233-6108732 Phaseolus vulgaris
Phvul.010G040900 1.0kb upstream 1.0kb upstream 8439 true Chr10: 6108733-6117171 Phaseolus vulgaris
Phvul.010G040900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 6116172-6117171 Phaseolus vulgaris
Phvul.010G040900 1.0kb downstream 1.0kb downstream 8439 true Chr10: 6107733-6116171 Phaseolus vulgaris
Phvul.010G040900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 6107733-6108732 Phaseolus vulgaris
Phvul.010G040900 2.0kb upstream 2.0kb upstream 9439 true Chr10: 6108733-6118171 Phaseolus vulgaris
Phvul.010G040900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 6116172-6118171 Phaseolus vulgaris
Phvul.010G040900 2.0kb downstream 2.0kb downstream 9439 true Chr10: 6106733-6116171 Phaseolus vulgaris
Phvul.010G040900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 6106733-6108732 Phaseolus vulgaris
Phvul.010G040900 5.0kb upstream 5.0kb upstream 12439 true Chr10: 6108733-6121171 Phaseolus vulgaris
Phvul.010G040900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 6116172-6121171 Phaseolus vulgaris
Phvul.010G040900 5.0kb downstream 5.0kb downstream 12439 true Chr10: 6103733-6116171 Phaseolus vulgaris
Phvul.010G040900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 6103733-6108732 Phaseolus vulgaris
Phvul.010G040900 10.0kb upstream 10.0kb upstream 17439 true Chr10: 6108733-6126171 Phaseolus vulgaris
Phvul.010G040900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 6116172-6126171 Phaseolus vulgaris
Phvul.010G040900 10.0kb downstream 10.0kb downstream 17439 true Chr10: 6098733-6116171 Phaseolus vulgaris
Phvul.010G040900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 6098733-6108732 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297705 5265 Fabidae View MSA
124036120 5270 Rosid View MSA
123749597 5271 Pentapetalae View MSA
122793437 5272 Eudicot View MSA
122046512 5273 Angiosperm View MSA
121348434 5274 Embryophyte View MSA
123428236 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.89466 0.0 8.48817    
cufflinks 1.81169 0.0 5.61682    
cufflinks 0.231948 0.0 0.884568 Low Low
cufflinks 0.910402 0.0 3.0673    
cufflinks 0.525324 0.0 1.8802 Low Low
cufflinks 0.536256 0.0 1.90195 Low  
cufflinks 4.54969 0.0 12.7238   High
cufflinks 2.9195 0.0 8.52598    
cufflinks 2.64226 0.0 7.83496    
cufflinks 2.11142 0.0 6.44035    
cufflinks 1.03212 0.0 3.42389    

0 Strain