Gene : Phvul.005G182600 P. vulgaris v2.1
Defline:  (1 of 6) 2.4.1.69 - Galactoside 2-alpha-L-fucosyltransferase / Secretor-type beta-galactoside alpha-1->2 fucosyltransferase Genomic Order:  1725
Name:  ? Phvul.005G182600 Secondary Identifier:  ? PAC:37152862
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G182600 0.5kb upstream 0.5kb upstream 4092 true Chr05: 40705706-40709797 Phaseolus vulgaris
Phvul.005G182600 0.5kb upstream 0.5kb upstream 500 false Chr05: 40705706-40706205 Phaseolus vulgaris
Phvul.005G182600 0.5kb downstream 0.5kb downstream 4092 true Chr05: 40706206-40710297 Phaseolus vulgaris
Phvul.005G182600 0.5kb downstream 0.5kb downstream 500 false Chr05: 40709798-40710297 Phaseolus vulgaris
Phvul.005G182600 1.0kb upstream 1.0kb upstream 4592 true Chr05: 40705206-40709797 Phaseolus vulgaris
Phvul.005G182600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40705206-40706205 Phaseolus vulgaris
Phvul.005G182600 1.0kb downstream 1.0kb downstream 4592 true Chr05: 40706206-40710797 Phaseolus vulgaris
Phvul.005G182600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40709798-40710797 Phaseolus vulgaris
Phvul.005G182600 2.0kb upstream 2.0kb upstream 5592 true Chr05: 40704206-40709797 Phaseolus vulgaris
Phvul.005G182600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40704206-40706205 Phaseolus vulgaris
Phvul.005G182600 2.0kb downstream 2.0kb downstream 5592 true Chr05: 40706206-40711797 Phaseolus vulgaris
Phvul.005G182600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40709798-40711797 Phaseolus vulgaris
Phvul.005G182600 5.0kb upstream 5.0kb upstream 8592 true Chr05: 40701206-40709797 Phaseolus vulgaris
Phvul.005G182600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40701206-40706205 Phaseolus vulgaris
Phvul.005G182600 5.0kb downstream 5.0kb downstream 8592 true Chr05: 40706206-40714797 Phaseolus vulgaris
Phvul.005G182600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40709798-40714797 Phaseolus vulgaris
Phvul.005G182600 10.0kb upstream 10.0kb upstream 13592 true Chr05: 40696206-40709797 Phaseolus vulgaris
Phvul.005G182600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40696206-40706205 Phaseolus vulgaris
Phvul.005G182600 10.0kb downstream 10.0kb downstream 13592 true Chr05: 40706206-40719797 Phaseolus vulgaris
Phvul.005G182600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40709798-40719797 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779854 5273 Angiosperm View MSA
122297429 5265 Fabidae View MSA
124036028 5270 Rosid View MSA
123744351 5271 Pentapetalae View MSA
122771038 5272 Eudicot View MSA
121351526 5274 Embryophyte View MSA
123427849 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.413507 0.0 1.5017 Low Low
cufflinks 1.54278 0.0 4.87432    
cufflinks 2.90342 0.0 8.48    
cufflinks 0.865584 0.0 2.94607   Low
cufflinks 2.33669 0.0 7.11031    
cufflinks 3.05717 0.0 8.9187    
cufflinks 2.71008 0.0 8.0404    
cufflinks 2.82913 0.0 8.27225    
cufflinks 1.77242 0.0 5.54276    
cufflinks 2.2732 0.0 6.88107    
cufflinks 1.76609 0.0 5.54761    

0 Strain