Gene : Phvul.005G182700 P. vulgaris v2.1
Defline:  (1 of 1) K15901 - EKC/KEOPS complex subunit CGI121/TPRKB (CGI121, TPRKB) Genomic Order:  1726
Name:  ? Phvul.005G182700 Secondary Identifier:  ? PAC:37153955
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G182700 0.5kb upstream 0.5kb upstream 2985 true Chr05: 40710512-40713496 Phaseolus vulgaris
Phvul.005G182700 0.5kb upstream 0.5kb upstream 500 false Chr05: 40710512-40711011 Phaseolus vulgaris
Phvul.005G182700 0.5kb downstream 0.5kb downstream 2985 true Chr05: 40711012-40713996 Phaseolus vulgaris
Phvul.005G182700 0.5kb downstream 0.5kb downstream 500 false Chr05: 40713497-40713996 Phaseolus vulgaris
Phvul.005G182700 1.0kb upstream 1.0kb upstream 3485 true Chr05: 40710012-40713496 Phaseolus vulgaris
Phvul.005G182700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40710012-40711011 Phaseolus vulgaris
Phvul.005G182700 1.0kb downstream 1.0kb downstream 3485 true Chr05: 40711012-40714496 Phaseolus vulgaris
Phvul.005G182700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40713497-40714496 Phaseolus vulgaris
Phvul.005G182700 2.0kb upstream 2.0kb upstream 4485 true Chr05: 40709012-40713496 Phaseolus vulgaris
Phvul.005G182700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40709012-40711011 Phaseolus vulgaris
Phvul.005G182700 2.0kb downstream 2.0kb downstream 4485 true Chr05: 40711012-40715496 Phaseolus vulgaris
Phvul.005G182700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40713497-40715496 Phaseolus vulgaris
Phvul.005G182700 5.0kb upstream 5.0kb upstream 7485 true Chr05: 40706012-40713496 Phaseolus vulgaris
Phvul.005G182700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40706012-40711011 Phaseolus vulgaris
Phvul.005G182700 5.0kb downstream 5.0kb downstream 7485 true Chr05: 40711012-40718496 Phaseolus vulgaris
Phvul.005G182700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40713497-40718496 Phaseolus vulgaris
Phvul.005G182700 10.0kb upstream 10.0kb upstream 12485 true Chr05: 40701012-40713496 Phaseolus vulgaris
Phvul.005G182700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40701012-40711011 Phaseolus vulgaris
Phvul.005G182700 10.0kb downstream 10.0kb downstream 12485 true Chr05: 40711012-40723496 Phaseolus vulgaris
Phvul.005G182700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40713497-40723496 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026161 5273 Angiosperm View MSA
122307041 5265 Fabidae View MSA
124060531 5270 Rosid View MSA
123741056 5271 Pentapetalae View MSA
122787559 5272 Eudicot View MSA
121345637 5274 Embryophyte View MSA
123425208 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.4888 0.0 94.9777   High
cufflinks 22.5594 0.0 81.2664    
cufflinks 20.8304 0.0 65.3623    
cufflinks 35.7019 0.0 117.95 High High
cufflinks 19.7768 0.0 74.146    
cufflinks 15.5512 0.0 51.9495    
cufflinks 13.597 0.0 54.507   Low
cufflinks 19.0742 0.0 70.9604    
cufflinks 15.3232 0.0 51.1831   Low
cufflinks 20.4172 0.0 75.5757    
cufflinks 20.7149 0.0 76.5012    

0 Strain