Gene : Phvul.005G181500 P. vulgaris v2.1
Defline:  (1 of 2) K10632 - BRCA1-associated protein (BRAP) Genomic Order:  1714
Name:  ? Phvul.005G181500 Secondary Identifier:  ? PAC:37152874
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G181500 0.5kb upstream 0.5kb upstream 3640 true Chr05: 40621536-40625175 Phaseolus vulgaris
Phvul.005G181500 0.5kb upstream 0.5kb upstream 500 false Chr05: 40624676-40625175 Phaseolus vulgaris
Phvul.005G181500 0.5kb downstream 0.5kb downstream 3640 true Chr05: 40621036-40624675 Phaseolus vulgaris
Phvul.005G181500 0.5kb downstream 0.5kb downstream 500 false Chr05: 40621036-40621535 Phaseolus vulgaris
Phvul.005G181500 1.0kb upstream 1.0kb upstream 4140 true Chr05: 40621536-40625675 Phaseolus vulgaris
Phvul.005G181500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40624676-40625675 Phaseolus vulgaris
Phvul.005G181500 1.0kb downstream 1.0kb downstream 4140 true Chr05: 40620536-40624675 Phaseolus vulgaris
Phvul.005G181500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40620536-40621535 Phaseolus vulgaris
Phvul.005G181500 2.0kb upstream 2.0kb upstream 5140 true Chr05: 40621536-40626675 Phaseolus vulgaris
Phvul.005G181500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40624676-40626675 Phaseolus vulgaris
Phvul.005G181500 2.0kb downstream 2.0kb downstream 5140 true Chr05: 40619536-40624675 Phaseolus vulgaris
Phvul.005G181500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40619536-40621535 Phaseolus vulgaris
Phvul.005G181500 5.0kb upstream 5.0kb upstream 8140 true Chr05: 40621536-40629675 Phaseolus vulgaris
Phvul.005G181500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40624676-40629675 Phaseolus vulgaris
Phvul.005G181500 5.0kb downstream 5.0kb downstream 8140 true Chr05: 40616536-40624675 Phaseolus vulgaris
Phvul.005G181500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40616536-40621535 Phaseolus vulgaris
Phvul.005G181500 10.0kb upstream 10.0kb upstream 13140 true Chr05: 40621536-40634675 Phaseolus vulgaris
Phvul.005G181500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40624676-40634675 Phaseolus vulgaris
Phvul.005G181500 10.0kb downstream 10.0kb downstream 13140 true Chr05: 40611536-40624675 Phaseolus vulgaris
Phvul.005G181500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40611536-40621535 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300036 5265 Fabidae View MSA
124067459 5270 Rosid View MSA
123739664 5271 Pentapetalae View MSA
122788885 5272 Eudicot View MSA
122049879 5273 Angiosperm View MSA
121344447 5274 Embryophyte View MSA
123425921 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.1945 0.0 45.9593   High
cufflinks 12.5307 0.0 36.5836    
cufflinks 7.62788 0.0 23.8585   Low
cufflinks 12.0115 0.0 35.6367    
cufflinks 12.722 0.0 37.4838    
cufflinks 6.65967 0.0 21.3791   Low
cufflinks 12.0578 0.0 35.4215    
cufflinks 10.8736 0.0 32.2634    
cufflinks 11.3306 0.0 40.8715    
cufflinks 18.809 0.0 67.1578   High
cufflinks 12.997 0.0 37.957    

0 Strain