Gene : Phvul.005G184000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10621:SF9 - F12F1.16 PROTEIN-RELATED Genomic Order:  1739
Name:  ? Phvul.005G184000 Secondary Identifier:  ? PAC:37152196
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G184000 0.5kb upstream 0.5kb upstream 5851 true Chr05: 40774763-40780613 Phaseolus vulgaris
Phvul.005G184000 0.5kb upstream 0.5kb upstream 500 false Chr05: 40780114-40780613 Phaseolus vulgaris
Phvul.005G184000 0.5kb downstream 0.5kb downstream 5851 true Chr05: 40774263-40780113 Phaseolus vulgaris
Phvul.005G184000 0.5kb downstream 0.5kb downstream 500 false Chr05: 40774263-40774762 Phaseolus vulgaris
Phvul.005G184000 1.0kb upstream 1.0kb upstream 6351 true Chr05: 40774763-40781113 Phaseolus vulgaris
Phvul.005G184000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40780114-40781113 Phaseolus vulgaris
Phvul.005G184000 1.0kb downstream 1.0kb downstream 6351 true Chr05: 40773763-40780113 Phaseolus vulgaris
Phvul.005G184000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40773763-40774762 Phaseolus vulgaris
Phvul.005G184000 2.0kb upstream 2.0kb upstream 7351 true Chr05: 40774763-40782113 Phaseolus vulgaris
Phvul.005G184000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40780114-40782113 Phaseolus vulgaris
Phvul.005G184000 2.0kb downstream 2.0kb downstream 7351 true Chr05: 40772763-40780113 Phaseolus vulgaris
Phvul.005G184000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40772763-40774762 Phaseolus vulgaris
Phvul.005G184000 5.0kb upstream 5.0kb upstream 10351 true Chr05: 40774763-40785113 Phaseolus vulgaris
Phvul.005G184000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40780114-40785113 Phaseolus vulgaris
Phvul.005G184000 5.0kb downstream 5.0kb downstream 10351 true Chr05: 40769763-40780113 Phaseolus vulgaris
Phvul.005G184000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40769763-40774762 Phaseolus vulgaris
Phvul.005G184000 10.0kb upstream 10.0kb upstream 15351 true Chr05: 40774763-40790113 Phaseolus vulgaris
Phvul.005G184000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40780114-40790113 Phaseolus vulgaris
Phvul.005G184000 10.0kb downstream 10.0kb downstream 15351 true Chr05: 40764763-40780113 Phaseolus vulgaris
Phvul.005G184000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40764763-40774762 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312076 5265 Fabidae View MSA
124061824 5270 Rosid View MSA
123740240 5271 Pentapetalae View MSA
122785996 5272 Eudicot View MSA
122046102 5273 Angiosperm View MSA
121350140 5274 Embryophyte View MSA
123423951 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.70828 0.0 11.2672   Low
cufflinks 7.33681 0.0 30.9289   High
cufflinks 4.59359 0.0 19.102    
cufflinks 4.18048 0.0 18.4706    
cufflinks 5.45515 0.0 25.2605    
cufflinks 8.02767 0.0 32.8862   High
cufflinks 4.2973 0.0 21.2038    
cufflinks 4.48174 0.0 18.5961    
cufflinks 5.29579 0.0 21.6712    
cufflinks 4.87855 0.0 23.5402    
cufflinks 5.58496 0.0 25.5708    

0 Strain