Gene : Phvul.010G045300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR12771:SF20 - ELMO/CED-12 DOMAIN-CONTAINING PROTEIN Genomic Order:  445
Name:  ? Phvul.010G045300 Secondary Identifier:  ? PAC:37142617
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G045300 0.5kb upstream 0.5kb upstream 5725 true Chr10: 6929101-6934825 Phaseolus vulgaris
Phvul.010G045300 0.5kb upstream 0.5kb upstream 500 false Chr10: 6929101-6929600 Phaseolus vulgaris
Phvul.010G045300 0.5kb downstream 0.5kb downstream 5725 true Chr10: 6929601-6935325 Phaseolus vulgaris
Phvul.010G045300 0.5kb downstream 0.5kb downstream 500 false Chr10: 6934826-6935325 Phaseolus vulgaris
Phvul.010G045300 1.0kb upstream 1.0kb upstream 6225 true Chr10: 6928601-6934825 Phaseolus vulgaris
Phvul.010G045300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 6928601-6929600 Phaseolus vulgaris
Phvul.010G045300 1.0kb downstream 1.0kb downstream 6225 true Chr10: 6929601-6935825 Phaseolus vulgaris
Phvul.010G045300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 6934826-6935825 Phaseolus vulgaris
Phvul.010G045300 2.0kb upstream 2.0kb upstream 7225 true Chr10: 6927601-6934825 Phaseolus vulgaris
Phvul.010G045300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 6927601-6929600 Phaseolus vulgaris
Phvul.010G045300 2.0kb downstream 2.0kb downstream 7225 true Chr10: 6929601-6936825 Phaseolus vulgaris
Phvul.010G045300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 6934826-6936825 Phaseolus vulgaris
Phvul.010G045300 5.0kb upstream 5.0kb upstream 10225 true Chr10: 6924601-6934825 Phaseolus vulgaris
Phvul.010G045300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 6924601-6929600 Phaseolus vulgaris
Phvul.010G045300 5.0kb downstream 5.0kb downstream 10225 true Chr10: 6929601-6939825 Phaseolus vulgaris
Phvul.010G045300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 6934826-6939825 Phaseolus vulgaris
Phvul.010G045300 10.0kb upstream 10.0kb upstream 15225 true Chr10: 6919601-6934825 Phaseolus vulgaris
Phvul.010G045300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 6919601-6929600 Phaseolus vulgaris
Phvul.010G045300 10.0kb downstream 10.0kb downstream 15225 true Chr10: 6929601-6944825 Phaseolus vulgaris
Phvul.010G045300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 6934826-6944825 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121655979 5273 Angiosperm View MSA
122296970 5265 Fabidae View MSA
124035848 5270 Rosid View MSA
123609305 5271 Pentapetalae View MSA
122643954 5272 Eudicot View MSA
120928073 5274 Embryophyte View MSA
122968699 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.4912 0.0 60.9046    
cufflinks 11.1111 0.0 49.5604    
cufflinks 15.8906 0.0 55.7228    
cufflinks 36.6548 0.0 137.172 High High
cufflinks 23.0653 0.0 90.1137    
cufflinks 20.0742 0.0 68.4194    
cufflinks 10.7748 0.0 48.5375    
cufflinks 8.63321 0.0 41.4729    
cufflinks 9.16265 0.0 36.8002    
cufflinks 6.57129 0.0 28.5719   Low
cufflinks 28.8636 0.0 111.989   High

0 Strain