Gene : Phvul.005G184800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31288:SF5 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MXL8-RELATED Genomic Order:  1747
Name:  ? Phvul.005G184800 Secondary Identifier:  ? PAC:37154439
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G184800 0.5kb upstream 0.5kb upstream 4418 true Chr05: 40819642-40824059 Phaseolus vulgaris
Phvul.005G184800 0.5kb upstream 0.5kb upstream 500 false Chr05: 40819642-40820141 Phaseolus vulgaris
Phvul.005G184800 0.5kb downstream 0.5kb downstream 4418 true Chr05: 40820142-40824559 Phaseolus vulgaris
Phvul.005G184800 0.5kb downstream 0.5kb downstream 500 false Chr05: 40824060-40824559 Phaseolus vulgaris
Phvul.005G184800 1.0kb upstream 1.0kb upstream 4918 true Chr05: 40819142-40824059 Phaseolus vulgaris
Phvul.005G184800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40819142-40820141 Phaseolus vulgaris
Phvul.005G184800 1.0kb downstream 1.0kb downstream 4918 true Chr05: 40820142-40825059 Phaseolus vulgaris
Phvul.005G184800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40824060-40825059 Phaseolus vulgaris
Phvul.005G184800 2.0kb upstream 2.0kb upstream 5918 true Chr05: 40818142-40824059 Phaseolus vulgaris
Phvul.005G184800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40818142-40820141 Phaseolus vulgaris
Phvul.005G184800 2.0kb downstream 2.0kb downstream 5918 true Chr05: 40820142-40826059 Phaseolus vulgaris
Phvul.005G184800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40824060-40826059 Phaseolus vulgaris
Phvul.005G184800 5.0kb upstream 5.0kb upstream 8918 true Chr05: 40815142-40824059 Phaseolus vulgaris
Phvul.005G184800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40815142-40820141 Phaseolus vulgaris
Phvul.005G184800 5.0kb downstream 5.0kb downstream 8918 true Chr05: 40820142-40829059 Phaseolus vulgaris
Phvul.005G184800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40824060-40829059 Phaseolus vulgaris
Phvul.005G184800 10.0kb upstream 10.0kb upstream 13918 true Chr05: 40810142-40824059 Phaseolus vulgaris
Phvul.005G184800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40810142-40820141 Phaseolus vulgaris
Phvul.005G184800 10.0kb downstream 10.0kb downstream 13918 true Chr05: 40820142-40834059 Phaseolus vulgaris
Phvul.005G184800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40824060-40834059 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041437 5273 Angiosperm View MSA
122255270 5265 Fabidae View MSA
124067612 5270 Rosid View MSA
123741790 5271 Pentapetalae View MSA
122786128 5272 Eudicot View MSA
121350497 5274 Embryophyte View MSA
123381757 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.672 0.0 33.2718   Low
cufflinks 21.976 0.0 56.8069    
cufflinks 27.0284 0.0 69.9918    
cufflinks 51.7517 0.0 136.798 High High
cufflinks 23.6605 0.0 61.1704    
cufflinks 48.4962 0.0 128.94 High High
cufflinks 23.9802 0.0 62.0012    
cufflinks 10.2826 0.0 27.2249   Low
cufflinks 21.7928 0.0 56.3344    
cufflinks 27.0576 0.0 70.0079    
cufflinks 66.2603 0.0 179.658 High High

0 Strain