Gene : Phvul.005G185400 P. vulgaris v2.1
Defline:  (1 of 3) PF12576 - Protein of unknown function (DUF3754) (DUF3754) Genomic Order:  1753
Name:  ? Phvul.005G185400 Secondary Identifier:  ? PAC:37152738
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G185400 0.5kb upstream 0.5kb upstream 10843 true Chr05: 40854187-40865029 Phaseolus vulgaris
Phvul.005G185400 0.5kb upstream 0.5kb upstream 500 false Chr05: 40864530-40865029 Phaseolus vulgaris
Phvul.005G185400 0.5kb downstream 0.5kb downstream 10843 true Chr05: 40853687-40864529 Phaseolus vulgaris
Phvul.005G185400 0.5kb downstream 0.5kb downstream 500 false Chr05: 40853687-40854186 Phaseolus vulgaris
Phvul.005G185400 1.0kb upstream 1.0kb upstream 11343 true Chr05: 40854187-40865529 Phaseolus vulgaris
Phvul.005G185400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40864530-40865529 Phaseolus vulgaris
Phvul.005G185400 1.0kb downstream 1.0kb downstream 11343 true Chr05: 40853187-40864529 Phaseolus vulgaris
Phvul.005G185400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40853187-40854186 Phaseolus vulgaris
Phvul.005G185400 2.0kb upstream 2.0kb upstream 12343 true Chr05: 40854187-40866529 Phaseolus vulgaris
Phvul.005G185400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40864530-40866529 Phaseolus vulgaris
Phvul.005G185400 2.0kb downstream 2.0kb downstream 12343 true Chr05: 40852187-40864529 Phaseolus vulgaris
Phvul.005G185400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40852187-40854186 Phaseolus vulgaris
Phvul.005G185400 5.0kb upstream 5.0kb upstream 15343 true Chr05: 40854187-40869529 Phaseolus vulgaris
Phvul.005G185400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40864530-40869529 Phaseolus vulgaris
Phvul.005G185400 5.0kb downstream 5.0kb downstream 15343 true Chr05: 40849187-40864529 Phaseolus vulgaris
Phvul.005G185400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40849187-40854186 Phaseolus vulgaris
Phvul.005G185400 10.0kb upstream 10.0kb upstream 20343 true Chr05: 40854187-40874529 Phaseolus vulgaris
Phvul.005G185400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40864530-40874529 Phaseolus vulgaris
Phvul.005G185400 10.0kb downstream 10.0kb downstream 20343 true Chr05: 40844187-40864529 Phaseolus vulgaris
Phvul.005G185400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40844187-40854186 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305848 5265 Fabidae View MSA
124061940 5270 Rosid View MSA
123737841 5271 Pentapetalae View MSA
122790087 5272 Eudicot View MSA
122042590 5273 Angiosperm View MSA
121345760 5274 Embryophyte View MSA
123428488 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.48991 0.0 5.16806   Low
cufflinks 3.5011 0.0 12.2522    
cufflinks 20.7772 0.0 73.6688   High
cufflinks 2.36259 0.0 7.53856    
cufflinks 2.83725 0.0 11.0446    
cufflinks 11.346 0.0 37.5479   High
cufflinks 2.0691 0.0 8.51427    
cufflinks 3.11122 0.0 13.4123    
cufflinks 1.22457 0.0 4.4188   Low
cufflinks 7.0881 0.0 25.267    
cufflinks 2.92051 0.0 11.5192    

0 Strain