Gene : Phvul.010G044700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24012:SF493 - RNA-BINDING PROTEIN 28 Genomic Order:  439
Name:  ? Phvul.010G044700 Secondary Identifier:  ? PAC:37143770
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G044700 0.5kb upstream 0.5kb upstream 6191 true Chr10: 6805367-6811557 Phaseolus vulgaris
Phvul.010G044700 0.5kb upstream 0.5kb upstream 500 false Chr10: 6805367-6805866 Phaseolus vulgaris
Phvul.010G044700 0.5kb downstream 0.5kb downstream 6191 true Chr10: 6805867-6812057 Phaseolus vulgaris
Phvul.010G044700 0.5kb downstream 0.5kb downstream 500 false Chr10: 6811558-6812057 Phaseolus vulgaris
Phvul.010G044700 1.0kb upstream 1.0kb upstream 6691 true Chr10: 6804867-6811557 Phaseolus vulgaris
Phvul.010G044700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 6804867-6805866 Phaseolus vulgaris
Phvul.010G044700 1.0kb downstream 1.0kb downstream 6691 true Chr10: 6805867-6812557 Phaseolus vulgaris
Phvul.010G044700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 6811558-6812557 Phaseolus vulgaris
Phvul.010G044700 2.0kb upstream 2.0kb upstream 7691 true Chr10: 6803867-6811557 Phaseolus vulgaris
Phvul.010G044700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 6803867-6805866 Phaseolus vulgaris
Phvul.010G044700 2.0kb downstream 2.0kb downstream 7691 true Chr10: 6805867-6813557 Phaseolus vulgaris
Phvul.010G044700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 6811558-6813557 Phaseolus vulgaris
Phvul.010G044700 5.0kb upstream 5.0kb upstream 10691 true Chr10: 6800867-6811557 Phaseolus vulgaris
Phvul.010G044700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 6800867-6805866 Phaseolus vulgaris
Phvul.010G044700 5.0kb downstream 5.0kb downstream 10691 true Chr10: 6805867-6816557 Phaseolus vulgaris
Phvul.010G044700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 6811558-6816557 Phaseolus vulgaris
Phvul.010G044700 10.0kb upstream 10.0kb upstream 15691 true Chr10: 6795867-6811557 Phaseolus vulgaris
Phvul.010G044700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 6795867-6805866 Phaseolus vulgaris
Phvul.010G044700 10.0kb downstream 10.0kb downstream 15691 true Chr10: 6805867-6821557 Phaseolus vulgaris
Phvul.010G044700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 6811558-6821557 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041174 5273 Angiosperm View MSA
122303901 5265 Fabidae View MSA
124068626 5270 Rosid View MSA
123750453 5271 Pentapetalae View MSA
122797248 5272 Eudicot View MSA
123429142 5275 Viridiplantae View MSA
121349565 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.6862 0.0 59.4207   Low
cufflinks 28.1747 0.0 98.9479    
cufflinks 28.472 0.0 100.179    
cufflinks 16.1627 0.0 57.3803   Low
cufflinks 27.1075 0.0 93.4328    
cufflinks 35.9004 0.0 133.015 High  
cufflinks 34.5752 0.0 127.231 High  
cufflinks 37.2041 0.0 139.73 High  
cufflinks 33.5175 0.0 121.953 High  
cufflinks 36.6082 0.0 135.341 High  
cufflinks 28.4821 0.0 99.638    

0 Strain