Gene : Phvul.005G185900 P. vulgaris v2.1
Defline:  (1 of 2) K15025 - probable RNA-binding protein EIF1AD (EIF1AD) Genomic Order:  1758
Name:  ? Phvul.005G185900 Secondary Identifier:  ? PAC:37152509
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G185900 0.5kb upstream 0.5kb upstream 7306 true Chr05: 40908259-40915564 Phaseolus vulgaris
Phvul.005G185900 0.5kb upstream 0.5kb upstream 500 false Chr05: 40908259-40908758 Phaseolus vulgaris
Phvul.005G185900 0.5kb downstream 0.5kb downstream 7306 true Chr05: 40908759-40916064 Phaseolus vulgaris
Phvul.005G185900 0.5kb downstream 0.5kb downstream 500 false Chr05: 40915565-40916064 Phaseolus vulgaris
Phvul.005G185900 1.0kb upstream 1.0kb upstream 7806 true Chr05: 40907759-40915564 Phaseolus vulgaris
Phvul.005G185900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40907759-40908758 Phaseolus vulgaris
Phvul.005G185900 1.0kb downstream 1.0kb downstream 7806 true Chr05: 40908759-40916564 Phaseolus vulgaris
Phvul.005G185900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40915565-40916564 Phaseolus vulgaris
Phvul.005G185900 2.0kb upstream 2.0kb upstream 8806 true Chr05: 40906759-40915564 Phaseolus vulgaris
Phvul.005G185900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40906759-40908758 Phaseolus vulgaris
Phvul.005G185900 2.0kb downstream 2.0kb downstream 8806 true Chr05: 40908759-40917564 Phaseolus vulgaris
Phvul.005G185900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40915565-40917564 Phaseolus vulgaris
Phvul.005G185900 5.0kb upstream 5.0kb upstream 11806 true Chr05: 40903759-40915564 Phaseolus vulgaris
Phvul.005G185900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40903759-40908758 Phaseolus vulgaris
Phvul.005G185900 5.0kb downstream 5.0kb downstream 11806 true Chr05: 40908759-40920564 Phaseolus vulgaris
Phvul.005G185900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40915565-40920564 Phaseolus vulgaris
Phvul.005G185900 10.0kb upstream 10.0kb upstream 16806 true Chr05: 40898759-40915564 Phaseolus vulgaris
Phvul.005G185900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40898759-40908758 Phaseolus vulgaris
Phvul.005G185900 10.0kb downstream 10.0kb downstream 14740 true Chr05: 40908759-40923498 Phaseolus vulgaris
Phvul.005G185900 10.0kb downstream 10.0kb downstream 7934 false Chr05: 40915565-40923498 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300839 5265 Fabidae View MSA
124074389 5270 Rosid View MSA
123739178 5271 Pentapetalae View MSA
122790312 5272 Eudicot View MSA
122047089 5273 Angiosperm View MSA
121344267 5274 Embryophyte View MSA
123425448 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.7995 0.0 55.0685    
cufflinks 19.3949 0.0 58.9533   High
cufflinks 17.2824 0.0 53.5722    
cufflinks 15.8089 0.0 50.2855    
cufflinks 14.1626 0.0 46.4948    
cufflinks 10.5865 0.0 35.5266   Low
cufflinks 15.83 0.0 49.5313    
cufflinks 19.9372 0.0 59.8387   High
cufflinks 13.0091 0.0 42.0711    
cufflinks 15.5 0.0 48.8719    
cufflinks 14.7458 0.0 47.4648    

0 Strain