Gene : Phvul.005G185500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10887:SF140 - PROTEIN ERI-7 Genomic Order:  1754
Name:  ? Phvul.005G185500 Secondary Identifier:  ? PAC:37153881
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G185500 0.5kb upstream 0.5kb upstream 20380 true Chr05: 40867364-40887743 Phaseolus vulgaris
Phvul.005G185500 0.5kb upstream 0.5kb upstream 500 false Chr05: 40867364-40867863 Phaseolus vulgaris
Phvul.005G185500 0.5kb downstream 0.5kb downstream 20380 true Chr05: 40867864-40888243 Phaseolus vulgaris
Phvul.005G185500 0.5kb downstream 0.5kb downstream 500 false Chr05: 40887744-40888243 Phaseolus vulgaris
Phvul.005G185500 1.0kb upstream 1.0kb upstream 20880 true Chr05: 40866864-40887743 Phaseolus vulgaris
Phvul.005G185500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40866864-40867863 Phaseolus vulgaris
Phvul.005G185500 1.0kb downstream 1.0kb downstream 20880 true Chr05: 40867864-40888743 Phaseolus vulgaris
Phvul.005G185500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40887744-40888743 Phaseolus vulgaris
Phvul.005G185500 2.0kb upstream 2.0kb upstream 21880 true Chr05: 40865864-40887743 Phaseolus vulgaris
Phvul.005G185500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40865864-40867863 Phaseolus vulgaris
Phvul.005G185500 2.0kb downstream 2.0kb downstream 21880 true Chr05: 40867864-40889743 Phaseolus vulgaris
Phvul.005G185500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40887744-40889743 Phaseolus vulgaris
Phvul.005G185500 5.0kb upstream 5.0kb upstream 24880 true Chr05: 40862864-40887743 Phaseolus vulgaris
Phvul.005G185500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40862864-40867863 Phaseolus vulgaris
Phvul.005G185500 5.0kb downstream 5.0kb downstream 24880 true Chr05: 40867864-40892743 Phaseolus vulgaris
Phvul.005G185500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40887744-40892743 Phaseolus vulgaris
Phvul.005G185500 10.0kb upstream 10.0kb upstream 29880 true Chr05: 40857864-40887743 Phaseolus vulgaris
Phvul.005G185500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40857864-40867863 Phaseolus vulgaris
Phvul.005G185500 10.0kb downstream 10.0kb downstream 29880 true Chr05: 40867864-40897743 Phaseolus vulgaris
Phvul.005G185500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40887744-40897743 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307570 5265 Fabidae View MSA
124050375 5270 Rosid View MSA
123751960 5271 Pentapetalae View MSA
122793579 5272 Eudicot View MSA
122046375 5273 Angiosperm View MSA
123429092 5275 Viridiplantae View MSA
121350941 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.806704 0.0 3.15578   Low
cufflinks 1.89677 0.0 6.25779    
cufflinks 4.92269 0.0 15.8063    
cufflinks 0.75991 0.0 3.12972   Low
cufflinks 2.67119 0.0 8.15626    
cufflinks 4.47605 0.0 14.437    
cufflinks 4.33412 0.0 14.0881    
cufflinks 4.98856 0.0 15.9557    
cufflinks 4.20596 0.0 13.7576    
cufflinks 5.64405 0.0 19.9766    
cufflinks 1.62111 0.0 6.28026    

0 Strain