Gene : Phvul.006G124300 P. vulgaris v2.1
Genomic Order:  1237 Name:  ? Phvul.006G124300
Secondary Identifier:  ? PAC:37171557
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G124300 0.5kb upstream 0.5kb upstream 3501 true Chr06: 23248485-23251985 Phaseolus vulgaris
Phvul.006G124300 0.5kb upstream 0.5kb upstream 500 false Chr06: 23248485-23248984 Phaseolus vulgaris
Phvul.006G124300 0.5kb downstream 0.5kb downstream 3501 true Chr06: 23248985-23252485 Phaseolus vulgaris
Phvul.006G124300 0.5kb downstream 0.5kb downstream 500 false Chr06: 23251986-23252485 Phaseolus vulgaris
Phvul.006G124300 1.0kb upstream 1.0kb upstream 4001 true Chr06: 23247985-23251985 Phaseolus vulgaris
Phvul.006G124300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 23247985-23248984 Phaseolus vulgaris
Phvul.006G124300 1.0kb downstream 1.0kb downstream 4001 true Chr06: 23248985-23252985 Phaseolus vulgaris
Phvul.006G124300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 23251986-23252985 Phaseolus vulgaris
Phvul.006G124300 2.0kb upstream 2.0kb upstream 5001 true Chr06: 23246985-23251985 Phaseolus vulgaris
Phvul.006G124300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 23246985-23248984 Phaseolus vulgaris
Phvul.006G124300 2.0kb downstream 2.0kb downstream 5001 true Chr06: 23248985-23253985 Phaseolus vulgaris
Phvul.006G124300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 23251986-23253985 Phaseolus vulgaris
Phvul.006G124300 5.0kb upstream 5.0kb upstream 8001 true Chr06: 23243985-23251985 Phaseolus vulgaris
Phvul.006G124300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 23243985-23248984 Phaseolus vulgaris
Phvul.006G124300 5.0kb downstream 5.0kb downstream 8001 true Chr06: 23248985-23256985 Phaseolus vulgaris
Phvul.006G124300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 23251986-23256985 Phaseolus vulgaris
Phvul.006G124300 10.0kb upstream 10.0kb upstream 13001 true Chr06: 23238985-23251985 Phaseolus vulgaris
Phvul.006G124300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 23238985-23248984 Phaseolus vulgaris
Phvul.006G124300 10.0kb downstream 10.0kb downstream 13001 true Chr06: 23248985-23261985 Phaseolus vulgaris
Phvul.006G124300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 23251986-23261985 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301260 5265 Fabidae View MSA
124061028 5270 Rosid View MSA
123740705 5271 Pentapetalae View MSA
122794859 5272 Eudicot View MSA
122047772 5273 Angiosperm View MSA
121310791 5274 Embryophyte View MSA
123348191 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.50555 0.0 5.02941    
cufflinks 5.4466 0.0 15.8226   High
cufflinks 1.12421 0.0 3.9059    
cufflinks 0.730758 0.0 2.66747   Low
cufflinks 3.01398 0.0 9.49877    
cufflinks 6.43802 0.0 18.3783   High
cufflinks 3.44306 0.0 10.4921    
cufflinks 2.50216 0.0 7.86461    
cufflinks 3.52598 0.0 10.7337    
cufflinks 0.267064 0.0 1.05247 Low Low
cufflinks 3.20488 0.0 9.95007    

0 Strain