Gene : Phvul.006G124200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12873//PTHR12873:SF2 - T7-LIKE MITOCHONDRIAL DNA HELICASE // SUBFAMILY NOT NAMED Genomic Order:  1236
Name:  ? Phvul.006G124200 Secondary Identifier:  ? PAC:37171994
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G124200 0.5kb upstream 0.5kb upstream 6809 true Chr06: 23234762-23241570 Phaseolus vulgaris
Phvul.006G124200 0.5kb upstream 0.5kb upstream 500 false Chr06: 23234762-23235261 Phaseolus vulgaris
Phvul.006G124200 0.5kb downstream 0.5kb downstream 6809 true Chr06: 23235262-23242070 Phaseolus vulgaris
Phvul.006G124200 0.5kb downstream 0.5kb downstream 500 false Chr06: 23241571-23242070 Phaseolus vulgaris
Phvul.006G124200 1.0kb upstream 1.0kb upstream 7309 true Chr06: 23234262-23241570 Phaseolus vulgaris
Phvul.006G124200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 23234262-23235261 Phaseolus vulgaris
Phvul.006G124200 1.0kb downstream 1.0kb downstream 7309 true Chr06: 23235262-23242570 Phaseolus vulgaris
Phvul.006G124200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 23241571-23242570 Phaseolus vulgaris
Phvul.006G124200 2.0kb upstream 2.0kb upstream 8309 true Chr06: 23233262-23241570 Phaseolus vulgaris
Phvul.006G124200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 23233262-23235261 Phaseolus vulgaris
Phvul.006G124200 2.0kb downstream 2.0kb downstream 8309 true Chr06: 23235262-23243570 Phaseolus vulgaris
Phvul.006G124200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 23241571-23243570 Phaseolus vulgaris
Phvul.006G124200 5.0kb upstream 5.0kb upstream 11309 true Chr06: 23230262-23241570 Phaseolus vulgaris
Phvul.006G124200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 23230262-23235261 Phaseolus vulgaris
Phvul.006G124200 5.0kb downstream 5.0kb downstream 11309 true Chr06: 23235262-23246570 Phaseolus vulgaris
Phvul.006G124200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 23241571-23246570 Phaseolus vulgaris
Phvul.006G124200 10.0kb upstream 10.0kb upstream 16309 true Chr06: 23225262-23241570 Phaseolus vulgaris
Phvul.006G124200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 23225262-23235261 Phaseolus vulgaris
Phvul.006G124200 10.0kb downstream 10.0kb downstream 16309 true Chr06: 23235262-23251570 Phaseolus vulgaris
Phvul.006G124200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 23241571-23251570 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779308 5273 Angiosperm View MSA
122306397 5265 Fabidae View MSA
124073387 5270 Rosid View MSA
123742037 5271 Pentapetalae View MSA
122770181 5272 Eudicot View MSA
121050980 5274 Embryophyte View MSA
123091087 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.62665 0.0 35.9593    
cufflinks 8.90328 0.0 39.8972    
cufflinks 23.5017 0.0 86.7521   High
cufflinks 7.70619 0.0 34.9283    
cufflinks 4.69944 0.0 19.079    
cufflinks 12.7158 0.0 51.1517    
cufflinks 3.46874 0.0 14.704   Low
cufflinks 4.2343 0.0 16.7429    
cufflinks 2.20681 0.0 10.4635   Low
cufflinks 11.228 0.0 47.2202    
cufflinks 5.20669 0.0 20.104    

0 Strain