Gene : Phvul.009G013900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11945:SF219 - FLORAL HOMEOTIC PROTEIN APETALA 3 Genomic Order:  132
Name:  ? Phvul.009G013900 Secondary Identifier:  ? PAC:37151751
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G013900 0.5kb upstream 0.5kb upstream 4406 true Chr09: 2307159-2311564 Phaseolus vulgaris
Phvul.009G013900 0.5kb upstream 0.5kb upstream 500 false Chr09: 2307159-2307658 Phaseolus vulgaris
Phvul.009G013900 0.5kb downstream 0.5kb downstream 4406 true Chr09: 2307659-2312064 Phaseolus vulgaris
Phvul.009G013900 0.5kb downstream 0.5kb downstream 500 false Chr09: 2311565-2312064 Phaseolus vulgaris
Phvul.009G013900 1.0kb upstream 1.0kb upstream 4906 true Chr09: 2306659-2311564 Phaseolus vulgaris
Phvul.009G013900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 2306659-2307658 Phaseolus vulgaris
Phvul.009G013900 1.0kb downstream 1.0kb downstream 4906 true Chr09: 2307659-2312564 Phaseolus vulgaris
Phvul.009G013900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 2311565-2312564 Phaseolus vulgaris
Phvul.009G013900 2.0kb upstream 2.0kb upstream 5906 true Chr09: 2305659-2311564 Phaseolus vulgaris
Phvul.009G013900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 2305659-2307658 Phaseolus vulgaris
Phvul.009G013900 2.0kb downstream 2.0kb downstream 5906 true Chr09: 2307659-2313564 Phaseolus vulgaris
Phvul.009G013900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 2311565-2313564 Phaseolus vulgaris
Phvul.009G013900 5.0kb upstream 5.0kb upstream 8906 true Chr09: 2302659-2311564 Phaseolus vulgaris
Phvul.009G013900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 2302659-2307658 Phaseolus vulgaris
Phvul.009G013900 5.0kb downstream 5.0kb downstream 8906 true Chr09: 2307659-2316564 Phaseolus vulgaris
Phvul.009G013900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 2311565-2316564 Phaseolus vulgaris
Phvul.009G013900 10.0kb upstream 10.0kb upstream 13906 true Chr09: 2297659-2311564 Phaseolus vulgaris
Phvul.009G013900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 2297659-2307658 Phaseolus vulgaris
Phvul.009G013900 10.0kb downstream 10.0kb downstream 13906 true Chr09: 2307659-2321564 Phaseolus vulgaris
Phvul.009G013900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 2311565-2321564 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310470 5265 Fabidae View MSA
124071528 5270 Rosid View MSA
123747185 5271 Pentapetalae View MSA
122794431 5272 Eudicot View MSA
122047951 5273 Angiosperm View MSA
121310821 5274 Embryophyte View MSA
123348212 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 308.716 0.0 924.188 High High
cufflinks 4.05628 0.0 12.7023    
cufflinks 0.115339 0.0 0.502704 Low  
cufflinks 335.46 0.0 1024.72 High High
cufflinks 0.059204 0.0 0.277996 Low  
cufflinks 0.169951 0.0 0.714347 Low  
cufflinks 0.35551 0.0 1.40367 Low  
cufflinks 0.133137 0.0 0.570713 Low  
cufflinks 1.25494 0.0 4.45335    
cufflinks 0.358427 0.0 1.42302    
cufflinks 0.239284 0.0 0.980751 Low  

0 Strain