Gene : Phvul.009G013200 P. vulgaris v2.1
Defline:  (1 of 180) PF00847 - AP2 domain (AP2) Genomic Order:  125
Name:  ? Phvul.009G013200 Secondary Identifier:  ? PAC:37150911
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G013200 0.5kb upstream 0.5kb upstream 1250 true Chr09: 2155572-2156821 Phaseolus vulgaris
Phvul.009G013200 0.5kb upstream 0.5kb upstream 500 false Chr09: 2155572-2156071 Phaseolus vulgaris
Phvul.009G013200 0.5kb downstream 0.5kb downstream 1250 true Chr09: 2156072-2157321 Phaseolus vulgaris
Phvul.009G013200 0.5kb downstream 0.5kb downstream 500 false Chr09: 2156822-2157321 Phaseolus vulgaris
Phvul.009G013200 1.0kb upstream 1.0kb upstream 1750 true Chr09: 2155072-2156821 Phaseolus vulgaris
Phvul.009G013200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 2155072-2156071 Phaseolus vulgaris
Phvul.009G013200 1.0kb downstream 1.0kb downstream 1750 true Chr09: 2156072-2157821 Phaseolus vulgaris
Phvul.009G013200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 2156822-2157821 Phaseolus vulgaris
Phvul.009G013200 2.0kb upstream 2.0kb upstream 2750 true Chr09: 2154072-2156821 Phaseolus vulgaris
Phvul.009G013200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 2154072-2156071 Phaseolus vulgaris
Phvul.009G013200 2.0kb downstream 2.0kb downstream 2750 true Chr09: 2156072-2158821 Phaseolus vulgaris
Phvul.009G013200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 2156822-2158821 Phaseolus vulgaris
Phvul.009G013200 5.0kb upstream 5.0kb upstream 5750 true Chr09: 2151072-2156821 Phaseolus vulgaris
Phvul.009G013200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 2151072-2156071 Phaseolus vulgaris
Phvul.009G013200 5.0kb downstream 5.0kb downstream 5750 true Chr09: 2156072-2161821 Phaseolus vulgaris
Phvul.009G013200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 2156822-2161821 Phaseolus vulgaris
Phvul.009G013200 10.0kb upstream 10.0kb upstream 10750 true Chr09: 2146072-2156821 Phaseolus vulgaris
Phvul.009G013200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 2146072-2156071 Phaseolus vulgaris
Phvul.009G013200 10.0kb downstream 10.0kb downstream 10750 true Chr09: 2156072-2166821 Phaseolus vulgaris
Phvul.009G013200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 2156822-2166821 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312723 5265 Fabidae View MSA
124072690 5270 Rosid View MSA
123750816 5271 Pentapetalae View MSA
122794401 5272 Eudicot View MSA
122049756 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121349420 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.198876 0.0 0.860815 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.182532 0.0 0.799464 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.229226 0.0 0.975919 Low  
cufflinks 0.258139 0.0 1.08842 Low High
cufflinks 0.120032 0.0 0.542363 Low  
cufflinks 0.0564699 0.0 0.278737 Low Low
cufflinks 0.0541584 0.0 0.268683 Low Low

0 Strain