Gene : Phvul.009G016800 P. vulgaris v2.1
Defline:  (1 of 5) PTHR23201:SF2 - GIBBERELLIN-REGULATED PROTEIN 1-RELATED Genomic Order:  161
Name:  ? Phvul.009G016800 Secondary Identifier:  ? PAC:37150841
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G016800 0.5kb upstream 0.5kb upstream 1385 true Chr09: 3038040-3039424 Phaseolus vulgaris
Phvul.009G016800 0.5kb upstream 0.5kb upstream 500 false Chr09: 3038925-3039424 Phaseolus vulgaris
Phvul.009G016800 0.5kb downstream 0.5kb downstream 1385 true Chr09: 3037540-3038924 Phaseolus vulgaris
Phvul.009G016800 0.5kb downstream 0.5kb downstream 500 false Chr09: 3037540-3038039 Phaseolus vulgaris
Phvul.009G016800 1.0kb upstream 1.0kb upstream 1885 true Chr09: 3038040-3039924 Phaseolus vulgaris
Phvul.009G016800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 3038925-3039924 Phaseolus vulgaris
Phvul.009G016800 1.0kb downstream 1.0kb downstream 1885 true Chr09: 3037040-3038924 Phaseolus vulgaris
Phvul.009G016800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 3037040-3038039 Phaseolus vulgaris
Phvul.009G016800 2.0kb upstream 2.0kb upstream 2885 true Chr09: 3038040-3040924 Phaseolus vulgaris
Phvul.009G016800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 3038925-3040924 Phaseolus vulgaris
Phvul.009G016800 2.0kb downstream 2.0kb downstream 2885 true Chr09: 3036040-3038924 Phaseolus vulgaris
Phvul.009G016800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 3036040-3038039 Phaseolus vulgaris
Phvul.009G016800 5.0kb upstream 5.0kb upstream 5885 true Chr09: 3038040-3043924 Phaseolus vulgaris
Phvul.009G016800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 3038925-3043924 Phaseolus vulgaris
Phvul.009G016800 5.0kb downstream 5.0kb downstream 5885 true Chr09: 3033040-3038924 Phaseolus vulgaris
Phvul.009G016800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 3033040-3038039 Phaseolus vulgaris
Phvul.009G016800 10.0kb upstream 10.0kb upstream 10885 true Chr09: 3038040-3048924 Phaseolus vulgaris
Phvul.009G016800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 3038925-3048924 Phaseolus vulgaris
Phvul.009G016800 10.0kb downstream 10.0kb downstream 10885 true Chr09: 3028040-3038924 Phaseolus vulgaris
Phvul.009G016800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 3028040-3038039 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313461 5265 Fabidae View MSA
124073806 5270 Rosid View MSA
123751873 5271 Pentapetalae View MSA
122795637 5272 Eudicot View MSA
122051034 5273 Angiosperm View MSA
121312257 5274 Embryophyte View MSA
123349447 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 71.5429 0.0 185.939 High  
cufflinks 0.0686098 0.0 0.34268 Low Low
cufflinks 7.98939 0.0 25.3309    
cufflinks 243.885 0.0 659.69 High High
cufflinks 50.258 0.0 132.899 High  
cufflinks 19.3085 0.0 55.4148    
cufflinks 0.0795695 0.0 0.389693 Low Low
cufflinks 0.0628622 0.0 0.318287 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0783134 0.0 0.386557 Low Low
cufflinks 14.2783 0.0 42.3033    

0 Strain