Gene : Phvul.009G016300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12081:SF51 - TRANSCRIPTION FACTOR E2FC Genomic Order:  156
Name:  ? Phvul.009G016300 Secondary Identifier:  ? PAC:37151489
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G016300 0.5kb upstream 0.5kb upstream 4773 true Chr09: 2912211-2916983 Phaseolus vulgaris
Phvul.009G016300 0.5kb upstream 0.5kb upstream 500 false Chr09: 2916484-2916983 Phaseolus vulgaris
Phvul.009G016300 0.5kb downstream 0.5kb downstream 4773 true Chr09: 2911711-2916483 Phaseolus vulgaris
Phvul.009G016300 0.5kb downstream 0.5kb downstream 500 false Chr09: 2911711-2912210 Phaseolus vulgaris
Phvul.009G016300 1.0kb upstream 1.0kb upstream 5273 true Chr09: 2912211-2917483 Phaseolus vulgaris
Phvul.009G016300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 2916484-2917483 Phaseolus vulgaris
Phvul.009G016300 1.0kb downstream 1.0kb downstream 5273 true Chr09: 2911211-2916483 Phaseolus vulgaris
Phvul.009G016300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 2911211-2912210 Phaseolus vulgaris
Phvul.009G016300 2.0kb upstream 2.0kb upstream 6273 true Chr09: 2912211-2918483 Phaseolus vulgaris
Phvul.009G016300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 2916484-2918483 Phaseolus vulgaris
Phvul.009G016300 2.0kb downstream 2.0kb downstream 6273 true Chr09: 2910211-2916483 Phaseolus vulgaris
Phvul.009G016300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 2910211-2912210 Phaseolus vulgaris
Phvul.009G016300 5.0kb upstream 5.0kb upstream 9273 true Chr09: 2912211-2921483 Phaseolus vulgaris
Phvul.009G016300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 2916484-2921483 Phaseolus vulgaris
Phvul.009G016300 5.0kb downstream 5.0kb downstream 9273 true Chr09: 2907211-2916483 Phaseolus vulgaris
Phvul.009G016300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 2907211-2912210 Phaseolus vulgaris
Phvul.009G016300 10.0kb upstream 10.0kb upstream 14273 true Chr09: 2912211-2926483 Phaseolus vulgaris
Phvul.009G016300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 2916484-2926483 Phaseolus vulgaris
Phvul.009G016300 10.0kb downstream 10.0kb downstream 14273 true Chr09: 2902211-2916483 Phaseolus vulgaris
Phvul.009G016300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 2902211-2912210 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792207 5273 Angiosperm View MSA
122305494 5265 Fabidae View MSA
124061286 5270 Rosid View MSA
123738589 5271 Pentapetalae View MSA
122796961 5272 Eudicot View MSA
121063453 5274 Embryophyte View MSA
123428750 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.2038 0.0 9.96357   High
cufflinks 1.17238 0.0 7.76383    
cufflinks 1.17689 0.0 6.24052    
cufflinks 1.25772 0.0 5.17021    
cufflinks 1.1497 0.0 6.36078    
cufflinks 1.64061 0.0 8.12439    
cufflinks 1.23767 0.0 5.11875    
cufflinks 1.74223 0.0 10.3792    
cufflinks 1.74523 0.0 8.76591    
cufflinks 0.645569 0.0 2.91842   Low
cufflinks 1.35977 0.0 7.64235    

0 Strain