Gene : Phvul.009G019400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13871//PTHR13871:SF48 - THIOREDOXIN // SUBFAMILY NOT NAMED Genomic Order:  192
Name:  ? Phvul.009G019400 Secondary Identifier:  ? PAC:37150361
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G019400 0.5kb upstream 0.5kb upstream 6773 true Chr09: 3888751-3895523 Phaseolus vulgaris
Phvul.009G019400 0.5kb upstream 0.5kb upstream 500 false Chr09: 3888751-3889250 Phaseolus vulgaris
Phvul.009G019400 0.5kb downstream 0.5kb downstream 6773 true Chr09: 3889251-3896023 Phaseolus vulgaris
Phvul.009G019400 0.5kb downstream 0.5kb downstream 500 false Chr09: 3895524-3896023 Phaseolus vulgaris
Phvul.009G019400 1.0kb upstream 1.0kb upstream 7273 true Chr09: 3888251-3895523 Phaseolus vulgaris
Phvul.009G019400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 3888251-3889250 Phaseolus vulgaris
Phvul.009G019400 1.0kb downstream 1.0kb downstream 7273 true Chr09: 3889251-3896523 Phaseolus vulgaris
Phvul.009G019400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 3895524-3896523 Phaseolus vulgaris
Phvul.009G019400 2.0kb upstream 2.0kb upstream 8273 true Chr09: 3887251-3895523 Phaseolus vulgaris
Phvul.009G019400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 3887251-3889250 Phaseolus vulgaris
Phvul.009G019400 2.0kb downstream 2.0kb downstream 8273 true Chr09: 3889251-3897523 Phaseolus vulgaris
Phvul.009G019400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 3895524-3897523 Phaseolus vulgaris
Phvul.009G019400 5.0kb upstream 5.0kb upstream 11273 true Chr09: 3884251-3895523 Phaseolus vulgaris
Phvul.009G019400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 3884251-3889250 Phaseolus vulgaris
Phvul.009G019400 5.0kb downstream 5.0kb downstream 11273 true Chr09: 3889251-3900523 Phaseolus vulgaris
Phvul.009G019400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 3895524-3900523 Phaseolus vulgaris
Phvul.009G019400 10.0kb upstream 10.0kb upstream 16273 true Chr09: 3879251-3895523 Phaseolus vulgaris
Phvul.009G019400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 3879251-3889250 Phaseolus vulgaris
Phvul.009G019400 10.0kb downstream 10.0kb downstream 16273 true Chr09: 3889251-3905523 Phaseolus vulgaris
Phvul.009G019400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 3895524-3905523 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300624 5265 Fabidae View MSA
124070669 5270 Rosid View MSA
123742683 5271 Pentapetalae View MSA
122794391 5272 Eudicot View MSA
122048350 5273 Angiosperm View MSA
123428873 5275 Viridiplantae View MSA
121310937 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.0532 0.0 57.0149    
cufflinks 48.1565 0.0 127.535 High High
cufflinks 4.43881 0.0 12.7825    
cufflinks 14.042 0.0 36.8257    
cufflinks 6.46717 0.0 17.9837    
cufflinks 9.00713 0.0 24.2611    
cufflinks 2.26205 0.0 6.99193    
cufflinks 0.610123 0.0 2.18313   Low
cufflinks 0.959841 0.0 3.27263   Low
cufflinks 139.038 0.0 411.29 High High
cufflinks 14.3 0.0 37.3952    

0 Strain