Gene : Phvul.006G129000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12634:SF17 - SIT4 PHOSPHATASE-ASSOCIATED FAMILY PROTEIN Genomic Order:  1284
Name:  ? Phvul.006G129000 Secondary Identifier:  ? PAC:37173910
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G129000 0.5kb upstream 0.5kb upstream 15826 true Chr06: 23678721-23694546 Phaseolus vulgaris
Phvul.006G129000 0.5kb upstream 0.5kb upstream 500 false Chr06: 23678721-23679220 Phaseolus vulgaris
Phvul.006G129000 0.5kb downstream 0.5kb downstream 15826 true Chr06: 23679221-23695046 Phaseolus vulgaris
Phvul.006G129000 0.5kb downstream 0.5kb downstream 500 false Chr06: 23694547-23695046 Phaseolus vulgaris
Phvul.006G129000 1.0kb upstream 1.0kb upstream 16326 true Chr06: 23678221-23694546 Phaseolus vulgaris
Phvul.006G129000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 23678221-23679220 Phaseolus vulgaris
Phvul.006G129000 1.0kb downstream 1.0kb downstream 16326 true Chr06: 23679221-23695546 Phaseolus vulgaris
Phvul.006G129000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 23694547-23695546 Phaseolus vulgaris
Phvul.006G129000 2.0kb upstream 2.0kb upstream 17326 true Chr06: 23677221-23694546 Phaseolus vulgaris
Phvul.006G129000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 23677221-23679220 Phaseolus vulgaris
Phvul.006G129000 2.0kb downstream 2.0kb downstream 17326 true Chr06: 23679221-23696546 Phaseolus vulgaris
Phvul.006G129000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 23694547-23696546 Phaseolus vulgaris
Phvul.006G129000 5.0kb upstream 5.0kb upstream 20326 true Chr06: 23674221-23694546 Phaseolus vulgaris
Phvul.006G129000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 23674221-23679220 Phaseolus vulgaris
Phvul.006G129000 5.0kb downstream 5.0kb downstream 20326 true Chr06: 23679221-23699546 Phaseolus vulgaris
Phvul.006G129000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 23694547-23699546 Phaseolus vulgaris
Phvul.006G129000 10.0kb upstream 10.0kb upstream 25326 true Chr06: 23669221-23694546 Phaseolus vulgaris
Phvul.006G129000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 23669221-23679220 Phaseolus vulgaris
Phvul.006G129000 10.0kb downstream 10.0kb downstream 25326 true Chr06: 23679221-23704546 Phaseolus vulgaris
Phvul.006G129000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 23694547-23704546 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299962 5265 Fabidae View MSA
124069403 5270 Rosid View MSA
123742234 5271 Pentapetalae View MSA
122794805 5272 Eudicot View MSA
122051052 5273 Angiosperm View MSA
121347725 5274 Embryophyte View MSA
123428189 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.074 0.0 40.1567   Low
cufflinks 15.9545 0.0 57.1829    
cufflinks 24.0065 0.0 78.1357   High
cufflinks 10.7084 0.0 35.8757   Low
cufflinks 18.5677 0.0 66.004    
cufflinks 20.4437 0.0 65.39    
cufflinks 24.4245 0.0 91.0273   High
cufflinks 17.4288 0.0 55.4672    
cufflinks 21.7644 0.0 79.2397    
cufflinks 18.6771 0.0 67.1809    
cufflinks 18.268 0.0 65.6118    

0 Strain