Gene : Phvul.006G114300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31384:SF17 - AUXIN RESPONSE FACTOR 11-RELATED Genomic Order:  1134
Name:  ? Phvul.006G114300 Secondary Identifier:  ? PAC:37173156
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G114300 0.5kb upstream 0.5kb upstream 5504 true Chr06: 22296855-22302358 Phaseolus vulgaris
Phvul.006G114300 0.5kb upstream 0.5kb upstream 500 false Chr06: 22296855-22297354 Phaseolus vulgaris
Phvul.006G114300 0.5kb downstream 0.5kb downstream 5504 true Chr06: 22297355-22302858 Phaseolus vulgaris
Phvul.006G114300 0.5kb downstream 0.5kb downstream 500 false Chr06: 22302359-22302858 Phaseolus vulgaris
Phvul.006G114300 1.0kb upstream 1.0kb upstream 6004 true Chr06: 22296355-22302358 Phaseolus vulgaris
Phvul.006G114300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 22296355-22297354 Phaseolus vulgaris
Phvul.006G114300 1.0kb downstream 1.0kb downstream 6004 true Chr06: 22297355-22303358 Phaseolus vulgaris
Phvul.006G114300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 22302359-22303358 Phaseolus vulgaris
Phvul.006G114300 2.0kb upstream 2.0kb upstream 7004 true Chr06: 22295355-22302358 Phaseolus vulgaris
Phvul.006G114300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 22295355-22297354 Phaseolus vulgaris
Phvul.006G114300 2.0kb downstream 2.0kb downstream 7004 true Chr06: 22297355-22304358 Phaseolus vulgaris
Phvul.006G114300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 22302359-22304358 Phaseolus vulgaris
Phvul.006G114300 5.0kb upstream 5.0kb upstream 10004 true Chr06: 22292355-22302358 Phaseolus vulgaris
Phvul.006G114300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 22292355-22297354 Phaseolus vulgaris
Phvul.006G114300 5.0kb downstream 5.0kb downstream 10004 true Chr06: 22297355-22307358 Phaseolus vulgaris
Phvul.006G114300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 22302359-22307358 Phaseolus vulgaris
Phvul.006G114300 10.0kb upstream 10.0kb upstream 15004 true Chr06: 22287355-22302358 Phaseolus vulgaris
Phvul.006G114300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 22287355-22297354 Phaseolus vulgaris
Phvul.006G114300 10.0kb downstream 10.0kb downstream 15004 true Chr06: 22297355-22312358 Phaseolus vulgaris
Phvul.006G114300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 22302359-22312358 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308659 5265 Fabidae View MSA
124070371 5270 Rosid View MSA
123743990 5271 Pentapetalae View MSA
122792006 5272 Eudicot View MSA
122050868 5273 Angiosperm View MSA
121348224 5274 Embryophyte View MSA
123380779 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.80245 0.0 10.5257   Low
cufflinks 17.6477 0.0 45.7644    
cufflinks 11.0577 0.0 28.6238    
cufflinks 2.55472 0.0 7.38203   Low
cufflinks 16.373 0.0 42.3662    
cufflinks 31.9209 0.0 85.5074    
cufflinks 70.1358 0.0 204.647 High High
cufflinks 58.2217 0.0 166.167 High High
cufflinks 46.091 0.0 127.753 High  
cufflinks 9.6377 0.0 25.0469    
cufflinks 20.0939 0.0 52.2706    

0 Strain