Gene : Phvul.009G006600 P. vulgaris v2.1
Defline:  (1 of 2) 1.2.1.13 - Glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) (phosphorylating) / Triosephosphate dehydrogenase (NADP+) Genomic Order:  64
Name:  ? Phvul.009G006600 Secondary Identifier:  ? PAC:37150520
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris CALVIN-PWY Phaseolus vulgaris pathologic  
Pvulgaris PHOTOALL-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G006600 0.5kb upstream 0.5kb upstream 4060 true Chr09: 1129930-1133989 Phaseolus vulgaris
Phvul.009G006600 0.5kb upstream 0.5kb upstream 500 false Chr09: 1133490-1133989 Phaseolus vulgaris
Phvul.009G006600 0.5kb downstream 0.5kb downstream 4060 true Chr09: 1129430-1133489 Phaseolus vulgaris
Phvul.009G006600 0.5kb downstream 0.5kb downstream 500 false Chr09: 1129430-1129929 Phaseolus vulgaris
Phvul.009G006600 1.0kb upstream 1.0kb upstream 4560 true Chr09: 1129930-1134489 Phaseolus vulgaris
Phvul.009G006600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 1133490-1134489 Phaseolus vulgaris
Phvul.009G006600 1.0kb downstream 1.0kb downstream 4560 true Chr09: 1128930-1133489 Phaseolus vulgaris
Phvul.009G006600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 1128930-1129929 Phaseolus vulgaris
Phvul.009G006600 2.0kb upstream 2.0kb upstream 5560 true Chr09: 1129930-1135489 Phaseolus vulgaris
Phvul.009G006600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 1133490-1135489 Phaseolus vulgaris
Phvul.009G006600 2.0kb downstream 2.0kb downstream 5560 true Chr09: 1127930-1133489 Phaseolus vulgaris
Phvul.009G006600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 1127930-1129929 Phaseolus vulgaris
Phvul.009G006600 5.0kb upstream 5.0kb upstream 8560 true Chr09: 1129930-1138489 Phaseolus vulgaris
Phvul.009G006600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 1133490-1138489 Phaseolus vulgaris
Phvul.009G006600 5.0kb downstream 5.0kb downstream 8560 true Chr09: 1124930-1133489 Phaseolus vulgaris
Phvul.009G006600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 1124930-1129929 Phaseolus vulgaris
Phvul.009G006600 10.0kb upstream 10.0kb upstream 13560 true Chr09: 1129930-1143489 Phaseolus vulgaris
Phvul.009G006600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 1133490-1143489 Phaseolus vulgaris
Phvul.009G006600 10.0kb downstream 10.0kb downstream 13560 true Chr09: 1119930-1133489 Phaseolus vulgaris
Phvul.009G006600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 1119930-1129929 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300267 5265 Fabidae View MSA
124062072 5270 Rosid View MSA
123746514 5271 Pentapetalae View MSA
122796484 5272 Eudicot View MSA
122047323 5273 Angiosperm View MSA
121310728 5274 Embryophyte View MSA
123425156 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 97.751 0.0 279.491 High  
cufflinks 220.518 0.0 715.037 High  
cufflinks 2372.57 0.0 14430.6 High High
cufflinks 158.713 0.0 481.687 High  
cufflinks 182.69 0.0 569.012 High  
cufflinks 698.967 0.0 3013.92 High  
cufflinks 0.842248 0.0 2.88293   Low
cufflinks 0.595889 0.0 2.11866   Low
cufflinks 0.494121 0.0 1.78714 Low Low
cufflinks 135.183 0.0 401.724 High  
cufflinks 144.406 0.0 433.649 High  

0 Strain