Gene : Phvul.006G115500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24073:SF345 - RAS-RELATED PROTEIN RABA3 Genomic Order:  1146
Name:  ? Phvul.006G115500 Secondary Identifier:  ? PAC:37173864
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G115500 0.5kb upstream 0.5kb upstream 2645 true Chr06: 22389022-22391666 Phaseolus vulgaris
Phvul.006G115500 0.5kb upstream 0.5kb upstream 500 false Chr06: 22389022-22389521 Phaseolus vulgaris
Phvul.006G115500 0.5kb downstream 0.5kb downstream 2645 true Chr06: 22389522-22392166 Phaseolus vulgaris
Phvul.006G115500 0.5kb downstream 0.5kb downstream 500 false Chr06: 22391667-22392166 Phaseolus vulgaris
Phvul.006G115500 1.0kb upstream 1.0kb upstream 3145 true Chr06: 22388522-22391666 Phaseolus vulgaris
Phvul.006G115500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 22388522-22389521 Phaseolus vulgaris
Phvul.006G115500 1.0kb downstream 1.0kb downstream 3145 true Chr06: 22389522-22392666 Phaseolus vulgaris
Phvul.006G115500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 22391667-22392666 Phaseolus vulgaris
Phvul.006G115500 2.0kb upstream 2.0kb upstream 4145 true Chr06: 22387522-22391666 Phaseolus vulgaris
Phvul.006G115500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 22387522-22389521 Phaseolus vulgaris
Phvul.006G115500 2.0kb downstream 2.0kb downstream 4145 true Chr06: 22389522-22393666 Phaseolus vulgaris
Phvul.006G115500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 22391667-22393666 Phaseolus vulgaris
Phvul.006G115500 5.0kb upstream 5.0kb upstream 7145 true Chr06: 22384522-22391666 Phaseolus vulgaris
Phvul.006G115500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 22384522-22389521 Phaseolus vulgaris
Phvul.006G115500 5.0kb downstream 5.0kb downstream 7145 true Chr06: 22389522-22396666 Phaseolus vulgaris
Phvul.006G115500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 22391667-22396666 Phaseolus vulgaris
Phvul.006G115500 10.0kb upstream 10.0kb upstream 12145 true Chr06: 22379522-22391666 Phaseolus vulgaris
Phvul.006G115500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 22379522-22389521 Phaseolus vulgaris
Phvul.006G115500 10.0kb downstream 10.0kb downstream 12145 true Chr06: 22389522-22401666 Phaseolus vulgaris
Phvul.006G115500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 22391667-22401666 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253572 5265 Fabidae View MSA
124068708 5270 Rosid View MSA
123748749 5271 Pentapetalae View MSA
122772791 5272 Eudicot View MSA
122042184 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.849526 0.0 3.02713   Low
cufflinks 5.95681 0.0 17.0925    
cufflinks 5.07697 0.0 14.8031    
cufflinks 6.61043 0.0 18.9719    
cufflinks 11.9809 0.0 32.4733   High
cufflinks 2.86409 0.0 8.92779    
cufflinks 4.86793 0.0 14.2502    
cufflinks 1.78572 0.0 5.83597    
cufflinks 2.72033 0.0 8.52602    
cufflinks 1.99886 0.0 6.50124    
cufflinks 9.53321 0.0 26.2869   High

0 Strain