Gene : Phvul.006G113300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31446:SF4 - ACID PHOSPHATASE/VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN Genomic Order:  1123
Name:  ? Phvul.006G113300 Secondary Identifier:  ? PAC:37172206
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G113300 0.5kb upstream 0.5kb upstream 4941 true Chr06: 22188306-22193246 Phaseolus vulgaris
Phvul.006G113300 0.5kb upstream 0.5kb upstream 500 false Chr06: 22188306-22188805 Phaseolus vulgaris
Phvul.006G113300 0.5kb downstream 0.5kb downstream 4941 true Chr06: 22188806-22193746 Phaseolus vulgaris
Phvul.006G113300 0.5kb downstream 0.5kb downstream 500 false Chr06: 22193247-22193746 Phaseolus vulgaris
Phvul.006G113300 1.0kb upstream 1.0kb upstream 5441 true Chr06: 22187806-22193246 Phaseolus vulgaris
Phvul.006G113300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 22187806-22188805 Phaseolus vulgaris
Phvul.006G113300 1.0kb downstream 1.0kb downstream 5441 true Chr06: 22188806-22194246 Phaseolus vulgaris
Phvul.006G113300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 22193247-22194246 Phaseolus vulgaris
Phvul.006G113300 2.0kb upstream 2.0kb upstream 6441 true Chr06: 22186806-22193246 Phaseolus vulgaris
Phvul.006G113300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 22186806-22188805 Phaseolus vulgaris
Phvul.006G113300 2.0kb downstream 2.0kb downstream 6441 true Chr06: 22188806-22195246 Phaseolus vulgaris
Phvul.006G113300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 22193247-22195246 Phaseolus vulgaris
Phvul.006G113300 5.0kb upstream 5.0kb upstream 9441 true Chr06: 22183806-22193246 Phaseolus vulgaris
Phvul.006G113300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 22183806-22188805 Phaseolus vulgaris
Phvul.006G113300 5.0kb downstream 5.0kb downstream 9441 true Chr06: 22188806-22198246 Phaseolus vulgaris
Phvul.006G113300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 22193247-22198246 Phaseolus vulgaris
Phvul.006G113300 10.0kb upstream 10.0kb upstream 14441 true Chr06: 22178806-22193246 Phaseolus vulgaris
Phvul.006G113300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 22178806-22188805 Phaseolus vulgaris
Phvul.006G113300 10.0kb downstream 10.0kb downstream 14441 true Chr06: 22188806-22203246 Phaseolus vulgaris
Phvul.006G113300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 22193247-22203246 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310808 5265 Fabidae View MSA
124066733 5270 Rosid View MSA
123749818 5271 Pentapetalae View MSA
122786289 5272 Eudicot View MSA
122043661 5273 Angiosperm View MSA
123429132 5275 Viridiplantae View MSA
121346257 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.54512 0.0 8.40837    
cufflinks 1.91253 0.0 6.54237    
cufflinks 2.83296 0.0 9.26136    
cufflinks 1.23834 0.0 4.40782   Low
cufflinks 3.79247 0.0 11.9334   High
cufflinks 3.83246 0.0 12.1209   High
cufflinks 1.884 0.0 6.42048    
cufflinks 1.82665 0.0 6.26617    
cufflinks 1.97504 0.0 6.71841    
cufflinks 1.79726 0.0 6.18021    
cufflinks 2.96067 0.0 9.60372    

0 Strain