Gene : Phvul.006G118300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR23257:SF485 - PAS DOMAIN-CONTAINING PROTEIN TYROSINE KINASE Genomic Order:  1175
Name:  ? Phvul.006G118300 Secondary Identifier:  ? PAC:37172350
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G118300 0.5kb upstream 0.5kb upstream 6171 true Chr06: 22641832-22648002 Phaseolus vulgaris
Phvul.006G118300 0.5kb upstream 0.5kb upstream 500 false Chr06: 22641832-22642331 Phaseolus vulgaris
Phvul.006G118300 0.5kb downstream 0.5kb downstream 6171 true Chr06: 22642332-22648502 Phaseolus vulgaris
Phvul.006G118300 0.5kb downstream 0.5kb downstream 500 false Chr06: 22648003-22648502 Phaseolus vulgaris
Phvul.006G118300 1.0kb upstream 1.0kb upstream 6671 true Chr06: 22641332-22648002 Phaseolus vulgaris
Phvul.006G118300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 22641332-22642331 Phaseolus vulgaris
Phvul.006G118300 1.0kb downstream 1.0kb downstream 6671 true Chr06: 22642332-22649002 Phaseolus vulgaris
Phvul.006G118300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 22648003-22649002 Phaseolus vulgaris
Phvul.006G118300 2.0kb upstream 2.0kb upstream 7671 true Chr06: 22640332-22648002 Phaseolus vulgaris
Phvul.006G118300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 22640332-22642331 Phaseolus vulgaris
Phvul.006G118300 2.0kb downstream 2.0kb downstream 7671 true Chr06: 22642332-22650002 Phaseolus vulgaris
Phvul.006G118300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 22648003-22650002 Phaseolus vulgaris
Phvul.006G118300 5.0kb upstream 5.0kb upstream 10671 true Chr06: 22637332-22648002 Phaseolus vulgaris
Phvul.006G118300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 22637332-22642331 Phaseolus vulgaris
Phvul.006G118300 5.0kb downstream 5.0kb downstream 10671 true Chr06: 22642332-22653002 Phaseolus vulgaris
Phvul.006G118300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 22648003-22653002 Phaseolus vulgaris
Phvul.006G118300 10.0kb upstream 10.0kb upstream 15671 true Chr06: 22632332-22648002 Phaseolus vulgaris
Phvul.006G118300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 22632332-22642331 Phaseolus vulgaris
Phvul.006G118300 10.0kb downstream 10.0kb downstream 15671 true Chr06: 22642332-22658002 Phaseolus vulgaris
Phvul.006G118300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 22648003-22658002 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311561 5265 Fabidae View MSA
124062417 5270 Rosid View MSA
123745190 5271 Pentapetalae View MSA
122793223 5272 Eudicot View MSA
122045433 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121310448 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.39394 0.0 16.6936    
cufflinks 7.98702 0.0 30.2391    
cufflinks 12.1731 0.0 39.4451   High
cufflinks 7.69568 0.0 23.5739    
cufflinks 5.12125 0.0 21.1256    
cufflinks 5.54433 0.0 20.1769    
cufflinks 4.8221 0.0 15.2565    
cufflinks 5.30278 0.0 19.3851    
cufflinks 5.82191 0.0 22.1921    
cufflinks 14.0831 0.0 45.5099   High
cufflinks 4.39597 0.0 14.3263    

0 Strain