Gene : Phvul.006G116300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23177:SF24 - RHO GTPASE-ACTIVATING PROTEIN 3-RELATED Genomic Order:  1154
Name:  ? Phvul.006G116300 Secondary Identifier:  ? PAC:37171849
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G116300 0.5kb upstream 0.5kb upstream 4250 true Chr06: 22470107-22474356 Phaseolus vulgaris
Phvul.006G116300 0.5kb upstream 0.5kb upstream 500 false Chr06: 22470107-22470606 Phaseolus vulgaris
Phvul.006G116300 0.5kb downstream 0.5kb downstream 4250 true Chr06: 22470607-22474856 Phaseolus vulgaris
Phvul.006G116300 0.5kb downstream 0.5kb downstream 500 false Chr06: 22474357-22474856 Phaseolus vulgaris
Phvul.006G116300 1.0kb upstream 1.0kb upstream 4750 true Chr06: 22469607-22474356 Phaseolus vulgaris
Phvul.006G116300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 22469607-22470606 Phaseolus vulgaris
Phvul.006G116300 1.0kb downstream 1.0kb downstream 4750 true Chr06: 22470607-22475356 Phaseolus vulgaris
Phvul.006G116300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 22474357-22475356 Phaseolus vulgaris
Phvul.006G116300 2.0kb upstream 2.0kb upstream 5750 true Chr06: 22468607-22474356 Phaseolus vulgaris
Phvul.006G116300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 22468607-22470606 Phaseolus vulgaris
Phvul.006G116300 2.0kb downstream 2.0kb downstream 5750 true Chr06: 22470607-22476356 Phaseolus vulgaris
Phvul.006G116300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 22474357-22476356 Phaseolus vulgaris
Phvul.006G116300 5.0kb upstream 5.0kb upstream 8750 true Chr06: 22465607-22474356 Phaseolus vulgaris
Phvul.006G116300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 22465607-22470606 Phaseolus vulgaris
Phvul.006G116300 5.0kb downstream 5.0kb downstream 8750 true Chr06: 22470607-22479356 Phaseolus vulgaris
Phvul.006G116300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 22474357-22479356 Phaseolus vulgaris
Phvul.006G116300 10.0kb upstream 10.0kb upstream 13750 true Chr06: 22460607-22474356 Phaseolus vulgaris
Phvul.006G116300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 22460607-22470606 Phaseolus vulgaris
Phvul.006G116300 10.0kb downstream 10.0kb downstream 13750 true Chr06: 22470607-22484356 Phaseolus vulgaris
Phvul.006G116300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 22474357-22484356 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301091 5265 Fabidae View MSA
124066975 5270 Rosid View MSA
123741878 5271 Pentapetalae View MSA
122795435 5272 Eudicot View MSA
122041800 5273 Angiosperm View MSA
121350100 5274 Embryophyte View MSA
123381579 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.72289 0.0 13.2433   Low
cufflinks 12.7453 0.0 33.2567    
cufflinks 33.7816 0.0 88.4168   High
cufflinks 19.521 0.0 50.4711    
cufflinks 12.0749 0.0 31.6672    
cufflinks 26.7978 0.0 69.5482   High
cufflinks 10.0909 0.0 26.5881    
cufflinks 10.8591 0.0 28.4938    
cufflinks 8.14088 0.0 21.812    
cufflinks 2.31906 0.0 7.06814   Low
cufflinks 24.0451 0.0 62.2144    

0 Strain