Gene : Phvul.009G007200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR21049:SF1 - DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 1A Genomic Order:  70
Name:  ? Phvul.009G007200 Secondary Identifier:  ? PAC:37149255
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G007200 0.5kb upstream 0.5kb upstream 4889 true Chr09: 1158362-1163250 Phaseolus vulgaris
Phvul.009G007200 0.5kb upstream 0.5kb upstream 500 false Chr09: 1158362-1158861 Phaseolus vulgaris
Phvul.009G007200 0.5kb downstream 0.5kb downstream 4889 true Chr09: 1158862-1163750 Phaseolus vulgaris
Phvul.009G007200 0.5kb downstream 0.5kb downstream 500 false Chr09: 1163251-1163750 Phaseolus vulgaris
Phvul.009G007200 1.0kb upstream 1.0kb upstream 5389 true Chr09: 1157862-1163250 Phaseolus vulgaris
Phvul.009G007200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 1157862-1158861 Phaseolus vulgaris
Phvul.009G007200 1.0kb downstream 1.0kb downstream 5389 true Chr09: 1158862-1164250 Phaseolus vulgaris
Phvul.009G007200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 1163251-1164250 Phaseolus vulgaris
Phvul.009G007200 2.0kb upstream 2.0kb upstream 6389 true Chr09: 1156862-1163250 Phaseolus vulgaris
Phvul.009G007200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 1156862-1158861 Phaseolus vulgaris
Phvul.009G007200 2.0kb downstream 2.0kb downstream 6389 true Chr09: 1158862-1165250 Phaseolus vulgaris
Phvul.009G007200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 1163251-1165250 Phaseolus vulgaris
Phvul.009G007200 5.0kb upstream 5.0kb upstream 9389 true Chr09: 1153862-1163250 Phaseolus vulgaris
Phvul.009G007200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 1153862-1158861 Phaseolus vulgaris
Phvul.009G007200 5.0kb downstream 5.0kb downstream 9389 true Chr09: 1158862-1168250 Phaseolus vulgaris
Phvul.009G007200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 1163251-1168250 Phaseolus vulgaris
Phvul.009G007200 10.0kb upstream 10.0kb upstream 14389 true Chr09: 1148862-1163250 Phaseolus vulgaris
Phvul.009G007200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 1148862-1158861 Phaseolus vulgaris
Phvul.009G007200 10.0kb downstream 10.0kb downstream 14389 true Chr09: 1158862-1173250 Phaseolus vulgaris
Phvul.009G007200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 1163251-1173250 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308076 5265 Fabidae View MSA
124068967 5270 Rosid View MSA
123737223 5271 Pentapetalae View MSA
122791942 5272 Eudicot View MSA
122045839 5273 Angiosperm View MSA
121344517 5274 Embryophyte View MSA
123425585 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.6271 0.0 55.9151   Low
cufflinks 42.4034 0.0 112.43 High High
cufflinks 31.1275 0.0 81.254    
cufflinks 44.0978 0.0 116.664 High High
cufflinks 24.7549 0.0 64.0338   Low
cufflinks 26.4458 0.0 68.5929    
cufflinks 30.9843 0.0 80.7748 High  
cufflinks 44.4945 0.0 118.937 High High
cufflinks 40.0651 0.0 105.669 High  
cufflinks 32.9297 0.0 85.9415    
cufflinks 30.7615 0.0 79.984    

0 Strain