Gene : Phvul.006G116400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22883:SF91 - PROTEIN S-ACYLTRANSFERASE 12-RELATED Genomic Order:  1155
Name:  ? Phvul.006G116400 Secondary Identifier:  ? PAC:37171355
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G116400 0.5kb upstream 0.5kb upstream 4279 true Chr06: 22477165-22481443 Phaseolus vulgaris
Phvul.006G116400 0.5kb upstream 0.5kb upstream 500 false Chr06: 22477165-22477664 Phaseolus vulgaris
Phvul.006G116400 0.5kb downstream 0.5kb downstream 4279 true Chr06: 22477665-22481943 Phaseolus vulgaris
Phvul.006G116400 0.5kb downstream 0.5kb downstream 500 false Chr06: 22481444-22481943 Phaseolus vulgaris
Phvul.006G116400 1.0kb upstream 1.0kb upstream 4779 true Chr06: 22476665-22481443 Phaseolus vulgaris
Phvul.006G116400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 22476665-22477664 Phaseolus vulgaris
Phvul.006G116400 1.0kb downstream 1.0kb downstream 4779 true Chr06: 22477665-22482443 Phaseolus vulgaris
Phvul.006G116400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 22481444-22482443 Phaseolus vulgaris
Phvul.006G116400 2.0kb upstream 2.0kb upstream 5779 true Chr06: 22475665-22481443 Phaseolus vulgaris
Phvul.006G116400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 22475665-22477664 Phaseolus vulgaris
Phvul.006G116400 2.0kb downstream 2.0kb downstream 5779 true Chr06: 22477665-22483443 Phaseolus vulgaris
Phvul.006G116400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 22481444-22483443 Phaseolus vulgaris
Phvul.006G116400 5.0kb upstream 5.0kb upstream 8779 true Chr06: 22472665-22481443 Phaseolus vulgaris
Phvul.006G116400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 22472665-22477664 Phaseolus vulgaris
Phvul.006G116400 5.0kb downstream 5.0kb downstream 8779 true Chr06: 22477665-22486443 Phaseolus vulgaris
Phvul.006G116400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 22481444-22486443 Phaseolus vulgaris
Phvul.006G116400 10.0kb upstream 10.0kb upstream 13779 true Chr06: 22467665-22481443 Phaseolus vulgaris
Phvul.006G116400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 22467665-22477664 Phaseolus vulgaris
Phvul.006G116400 10.0kb downstream 10.0kb downstream 13779 true Chr06: 22477665-22491443 Phaseolus vulgaris
Phvul.006G116400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 22481444-22491443 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305701 5265 Fabidae View MSA
124063930 5270 Rosid View MSA
123753690 5271 Pentapetalae View MSA
122792310 5272 Eudicot View MSA
122049662 5273 Angiosperm View MSA
121349206 5274 Embryophyte View MSA
123428148 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.0288 0.0 43.5074   Low
cufflinks 15.2317 0.0 53.1374    
cufflinks 20.1172 0.0 66.8584   High
cufflinks 19.6575 0.0 74.1687   High
cufflinks 15.6286 0.0 62.8023    
cufflinks 15.0149 0.0 60.7385    
cufflinks 13.8356 0.0 49.016    
cufflinks 13.7357 0.0 57.8565    
cufflinks 13.1309 0.0 47.4996    
cufflinks 10.7951 0.0 34.9414   Low
cufflinks 19.0314 0.0 64.0861   High

0 Strain