Gene : Phvul.006G120000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR20994:SF0 - ER MEMBRANE PROTEIN COMPLEX SUBUNIT 6 Genomic Order:  1194
Name:  ? Phvul.006G120000 Secondary Identifier:  ? PAC:37173146
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G120000 0.5kb upstream 0.5kb upstream 3779 true Chr06: 22839164-22842942 Phaseolus vulgaris
Phvul.006G120000 0.5kb upstream 0.5kb upstream 500 false Chr06: 22842443-22842942 Phaseolus vulgaris
Phvul.006G120000 0.5kb downstream 0.5kb downstream 3779 true Chr06: 22838664-22842442 Phaseolus vulgaris
Phvul.006G120000 0.5kb downstream 0.5kb downstream 500 false Chr06: 22838664-22839163 Phaseolus vulgaris
Phvul.006G120000 1.0kb upstream 1.0kb upstream 4279 true Chr06: 22839164-22843442 Phaseolus vulgaris
Phvul.006G120000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 22842443-22843442 Phaseolus vulgaris
Phvul.006G120000 1.0kb downstream 1.0kb downstream 4279 true Chr06: 22838164-22842442 Phaseolus vulgaris
Phvul.006G120000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 22838164-22839163 Phaseolus vulgaris
Phvul.006G120000 2.0kb upstream 2.0kb upstream 5279 true Chr06: 22839164-22844442 Phaseolus vulgaris
Phvul.006G120000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 22842443-22844442 Phaseolus vulgaris
Phvul.006G120000 2.0kb downstream 2.0kb downstream 5279 true Chr06: 22837164-22842442 Phaseolus vulgaris
Phvul.006G120000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 22837164-22839163 Phaseolus vulgaris
Phvul.006G120000 5.0kb upstream 5.0kb upstream 8279 true Chr06: 22839164-22847442 Phaseolus vulgaris
Phvul.006G120000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 22842443-22847442 Phaseolus vulgaris
Phvul.006G120000 5.0kb downstream 5.0kb downstream 8279 true Chr06: 22834164-22842442 Phaseolus vulgaris
Phvul.006G120000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 22834164-22839163 Phaseolus vulgaris
Phvul.006G120000 10.0kb upstream 10.0kb upstream 13279 true Chr06: 22839164-22852442 Phaseolus vulgaris
Phvul.006G120000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 22842443-22852442 Phaseolus vulgaris
Phvul.006G120000 10.0kb downstream 10.0kb downstream 13279 true Chr06: 22829164-22842442 Phaseolus vulgaris
Phvul.006G120000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 22829164-22839163 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041108 5273 Angiosperm View MSA
122305092 5265 Fabidae View MSA
124051289 5270 Rosid View MSA
123746962 5271 Pentapetalae View MSA
122786107 5272 Eudicot View MSA
121346930 5274 Embryophyte View MSA
123425261 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.227 0.0 59.2296    
cufflinks 17.1843 0.0 49.0323    
cufflinks 26.9907 0.0 73.7606    
cufflinks 31.8965 0.0 86.4132   High
cufflinks 13.9262 0.0 40.8006   Low
cufflinks 19.2903 0.0 54.4807    
cufflinks 21.5978 0.0 60.6322    
cufflinks 29.2051 0.0 79.3779 High High
cufflinks 25.6789 0.0 71.0488    
cufflinks 10.4082 0.0 31.4257   Low
cufflinks 15.15 0.0 44.0571    

0 Strain