Gene : Phvul.009G011100 P. vulgaris v2.1
Defline:  (1 of 2) K03781 - catalase (katE, CAT, catB, srpA) Genomic Order:  104
Name:  ? Phvul.009G011100 Secondary Identifier:  ? PAC:37149003
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris DETOX1-PWY Phaseolus vulgaris pathologic  
Pvulgaris DETOX1-PWY-1 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G011100 0.5kb upstream 0.5kb upstream 4940 true Chr09: 1898926-1903865 Phaseolus vulgaris
Phvul.009G011100 0.5kb upstream 0.5kb upstream 500 false Chr09: 1898926-1899425 Phaseolus vulgaris
Phvul.009G011100 0.5kb downstream 0.5kb downstream 4940 true Chr09: 1899426-1904365 Phaseolus vulgaris
Phvul.009G011100 0.5kb downstream 0.5kb downstream 500 false Chr09: 1903866-1904365 Phaseolus vulgaris
Phvul.009G011100 1.0kb upstream 1.0kb upstream 5440 true Chr09: 1898426-1903865 Phaseolus vulgaris
Phvul.009G011100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 1898426-1899425 Phaseolus vulgaris
Phvul.009G011100 1.0kb downstream 1.0kb downstream 5440 true Chr09: 1899426-1904865 Phaseolus vulgaris
Phvul.009G011100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 1903866-1904865 Phaseolus vulgaris
Phvul.009G011100 2.0kb upstream 2.0kb upstream 6440 true Chr09: 1897426-1903865 Phaseolus vulgaris
Phvul.009G011100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 1897426-1899425 Phaseolus vulgaris
Phvul.009G011100 2.0kb downstream 2.0kb downstream 6440 true Chr09: 1899426-1905865 Phaseolus vulgaris
Phvul.009G011100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 1903866-1905865 Phaseolus vulgaris
Phvul.009G011100 5.0kb upstream 5.0kb upstream 9440 true Chr09: 1894426-1903865 Phaseolus vulgaris
Phvul.009G011100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 1894426-1899425 Phaseolus vulgaris
Phvul.009G011100 5.0kb downstream 5.0kb downstream 9440 true Chr09: 1899426-1908865 Phaseolus vulgaris
Phvul.009G011100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 1903866-1908865 Phaseolus vulgaris
Phvul.009G011100 10.0kb upstream 10.0kb upstream 14440 true Chr09: 1889426-1903865 Phaseolus vulgaris
Phvul.009G011100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 1889426-1899425 Phaseolus vulgaris
Phvul.009G011100 10.0kb downstream 10.0kb downstream 14440 true Chr09: 1899426-1913865 Phaseolus vulgaris
Phvul.009G011100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 1903866-1913865 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040958 5273 Angiosperm View MSA
122309961 5265 Fabidae View MSA
124061092 5270 Rosid View MSA
123744547 5271 Pentapetalae View MSA
122789351 5272 Eudicot View MSA
121344781 5274 Embryophyte View MSA
123424047 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 724.838 0.0 3045.39 High High
cufflinks 148.437 0.0 442.363 High  
cufflinks 1084.92 0.0 5139.42 High High
cufflinks 191.62 0.0 591.744 High  
cufflinks 181.951 0.0 557.682 High  
cufflinks 258.759 0.0 848.532 High  
cufflinks 50.6075 0.0 134.456 High Low
cufflinks 119.957 0.0 348.001 High  
cufflinks 77.812 0.0 214.438 High Low
cufflinks 328.317 0.0 1126.83 High  
cufflinks 131.597 0.0 384.045 High  

0 Strain