Gene : Phvul.006G122200 P. vulgaris v2.1
Defline:  (1 of 8) K07937 - ADP-ribosylation factor 1 (ARF1) Genomic Order:  1216
Name:  ? Phvul.006G122200 Secondary Identifier:  ? PAC:37173639
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G122200 0.5kb upstream 0.5kb upstream 3099 true Chr06: 23083986-23087084 Phaseolus vulgaris
Phvul.006G122200 0.5kb upstream 0.5kb upstream 500 false Chr06: 23083986-23084485 Phaseolus vulgaris
Phvul.006G122200 0.5kb downstream 0.5kb downstream 3099 true Chr06: 23084486-23087584 Phaseolus vulgaris
Phvul.006G122200 0.5kb downstream 0.5kb downstream 500 false Chr06: 23087085-23087584 Phaseolus vulgaris
Phvul.006G122200 1.0kb upstream 1.0kb upstream 3599 true Chr06: 23083486-23087084 Phaseolus vulgaris
Phvul.006G122200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 23083486-23084485 Phaseolus vulgaris
Phvul.006G122200 1.0kb downstream 1.0kb downstream 3599 true Chr06: 23084486-23088084 Phaseolus vulgaris
Phvul.006G122200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 23087085-23088084 Phaseolus vulgaris
Phvul.006G122200 2.0kb upstream 2.0kb upstream 4599 true Chr06: 23082486-23087084 Phaseolus vulgaris
Phvul.006G122200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 23082486-23084485 Phaseolus vulgaris
Phvul.006G122200 2.0kb downstream 2.0kb downstream 4599 true Chr06: 23084486-23089084 Phaseolus vulgaris
Phvul.006G122200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 23087085-23089084 Phaseolus vulgaris
Phvul.006G122200 5.0kb upstream 5.0kb upstream 7599 true Chr06: 23079486-23087084 Phaseolus vulgaris
Phvul.006G122200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 23079486-23084485 Phaseolus vulgaris
Phvul.006G122200 5.0kb downstream 5.0kb downstream 7599 true Chr06: 23084486-23092084 Phaseolus vulgaris
Phvul.006G122200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 23087085-23092084 Phaseolus vulgaris
Phvul.006G122200 10.0kb upstream 10.0kb upstream 12599 true Chr06: 23074486-23087084 Phaseolus vulgaris
Phvul.006G122200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 23074486-23084485 Phaseolus vulgaris
Phvul.006G122200 10.0kb downstream 10.0kb downstream 12599 true Chr06: 23084486-23097084 Phaseolus vulgaris
Phvul.006G122200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 23087085-23097084 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315133 5265 Fabidae View MSA
124074730 5270 Rosid View MSA
123752155 5271 Pentapetalae View MSA
122796047 5272 Eudicot View MSA
122049759 5273 Angiosperm View MSA
123429166 5275 Viridiplantae View MSA
121351098 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.433808 0.0 1.75775    
cufflinks 0.310339 0.0 1.29491 Low  
cufflinks 0.186002 0.0 0.810687 Low Low
cufflinks 0.535516 0.0 2.14698 Low  
cufflinks 0.199028 0.0 0.871717 Low Low
cufflinks 0.211 0.0 0.910449 Low  
cufflinks 0.190438 0.0 0.833091 Low Low
cufflinks 1.2813 0.0 4.77274   High
cufflinks 1.04769 0.0 3.98363   High
cufflinks 0.881118 0.0 3.38951    
cufflinks 1.11107 0.0 4.20965   High

0 Strain