Gene : Phvul.009G012300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11216:SF72 - CALCIUM-BINDING EF HAND-CONTAINING PROTEIN Genomic Order:  116
Name:  ? Phvul.009G012300 Secondary Identifier:  ? PAC:37150871
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G012300 0.5kb upstream 0.5kb upstream 11605 true Chr09: 2045450-2057054 Phaseolus vulgaris
Phvul.009G012300 0.5kb upstream 0.5kb upstream 500 false Chr09: 2045450-2045949 Phaseolus vulgaris
Phvul.009G012300 0.5kb downstream 0.5kb downstream 11605 true Chr09: 2045950-2057554 Phaseolus vulgaris
Phvul.009G012300 0.5kb downstream 0.5kb downstream 500 false Chr09: 2057055-2057554 Phaseolus vulgaris
Phvul.009G012300 1.0kb upstream 1.0kb upstream 12105 true Chr09: 2044950-2057054 Phaseolus vulgaris
Phvul.009G012300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 2044950-2045949 Phaseolus vulgaris
Phvul.009G012300 1.0kb downstream 1.0kb downstream 12105 true Chr09: 2045950-2058054 Phaseolus vulgaris
Phvul.009G012300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 2057055-2058054 Phaseolus vulgaris
Phvul.009G012300 2.0kb upstream 2.0kb upstream 13105 true Chr09: 2043950-2057054 Phaseolus vulgaris
Phvul.009G012300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 2043950-2045949 Phaseolus vulgaris
Phvul.009G012300 2.0kb downstream 2.0kb downstream 13105 true Chr09: 2045950-2059054 Phaseolus vulgaris
Phvul.009G012300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 2057055-2059054 Phaseolus vulgaris
Phvul.009G012300 5.0kb upstream 5.0kb upstream 16105 true Chr09: 2040950-2057054 Phaseolus vulgaris
Phvul.009G012300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 2040950-2045949 Phaseolus vulgaris
Phvul.009G012300 5.0kb downstream 5.0kb downstream 16105 true Chr09: 2045950-2062054 Phaseolus vulgaris
Phvul.009G012300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 2057055-2062054 Phaseolus vulgaris
Phvul.009G012300 10.0kb upstream 10.0kb upstream 21105 true Chr09: 2035950-2057054 Phaseolus vulgaris
Phvul.009G012300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 2035950-2045949 Phaseolus vulgaris
Phvul.009G012300 10.0kb downstream 10.0kb downstream 21105 true Chr09: 2045950-2067054 Phaseolus vulgaris
Phvul.009G012300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 2057055-2067054 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303982 5265 Fabidae View MSA
124065520 5270 Rosid View MSA
123746825 5271 Pentapetalae View MSA
122791981 5272 Eudicot View MSA
122047031 5273 Angiosperm View MSA
121346987 5274 Embryophyte View MSA
123426341 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.93928 0.0 18.0339   Low
cufflinks 15.3805 0.0 40.1264    
cufflinks 19.9979 0.0 52.944    
cufflinks 7.70312 0.0 19.979   Low
cufflinks 19.5524 0.0 51.479    
cufflinks 22.4693 0.0 60.0083    
cufflinks 21.5055 0.0 57.3488    
cufflinks 16.2319 0.0 42.5236    
cufflinks 23.8303 0.0 64.0124    
cufflinks 23.9895 0.0 64.3859    
cufflinks 20.7269 0.0 54.8824    

0 Strain