Gene : Phvul.009G069600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12183:SF14 - RING-FINGER DOMAIN-CONTAINING PROTEIN Genomic Order:  715
Name:  ? Phvul.009G069600 Secondary Identifier:  ? PAC:37151278
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G069600 0.5kb upstream 0.5kb upstream 3353 true Chr09: 12131475-12134827 Phaseolus vulgaris
Phvul.009G069600 0.5kb upstream 0.5kb upstream 500 false Chr09: 12131475-12131974 Phaseolus vulgaris
Phvul.009G069600 0.5kb downstream 0.5kb downstream 3353 true Chr09: 12131975-12135327 Phaseolus vulgaris
Phvul.009G069600 0.5kb downstream 0.5kb downstream 500 false Chr09: 12134828-12135327 Phaseolus vulgaris
Phvul.009G069600 1.0kb upstream 1.0kb upstream 3853 true Chr09: 12130975-12134827 Phaseolus vulgaris
Phvul.009G069600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 12130975-12131974 Phaseolus vulgaris
Phvul.009G069600 1.0kb downstream 1.0kb downstream 3853 true Chr09: 12131975-12135827 Phaseolus vulgaris
Phvul.009G069600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 12134828-12135827 Phaseolus vulgaris
Phvul.009G069600 2.0kb upstream 2.0kb upstream 4853 true Chr09: 12129975-12134827 Phaseolus vulgaris
Phvul.009G069600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 12129975-12131974 Phaseolus vulgaris
Phvul.009G069600 2.0kb downstream 2.0kb downstream 4853 true Chr09: 12131975-12136827 Phaseolus vulgaris
Phvul.009G069600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 12134828-12136827 Phaseolus vulgaris
Phvul.009G069600 5.0kb upstream 5.0kb upstream 7853 true Chr09: 12126975-12134827 Phaseolus vulgaris
Phvul.009G069600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 12126975-12131974 Phaseolus vulgaris
Phvul.009G069600 5.0kb downstream 5.0kb downstream 7853 true Chr09: 12131975-12139827 Phaseolus vulgaris
Phvul.009G069600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 12134828-12139827 Phaseolus vulgaris
Phvul.009G069600 10.0kb upstream 10.0kb upstream 12853 true Chr09: 12121975-12134827 Phaseolus vulgaris
Phvul.009G069600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 12121975-12131974 Phaseolus vulgaris
Phvul.009G069600 10.0kb downstream 10.0kb downstream 12853 true Chr09: 12131975-12144827 Phaseolus vulgaris
Phvul.009G069600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 12134828-12144827 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301516 5265 Fabidae View MSA
124071043 5270 Rosid View MSA
123646755 5271 Pentapetalae View MSA
122796060 5272 Eudicot View MSA
122049703 5273 Angiosperm View MSA
121349312 5274 Embryophyte View MSA
123381271 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.75471 0.0 13.8458   High
cufflinks 2.1326 0.0 6.80224    
cufflinks 0.139368 0.0 0.571192 Low Low
cufflinks 3.56484 0.0 10.7986   High
cufflinks 0.869026 0.0 3.08423    
cufflinks 0.105085 0.0 0.4417 Low Low
cufflinks 0.409958 0.0 1.54541 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.275644 0.0 1.07398 Low  
cufflinks 0.773164 0.0 2.76344    
cufflinks 1.35002 0.0 4.56171    

0 Strain