Gene : Phvul.006G123000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR32096:SF18 - DISEASE RESISTANCE PROTEIN-LIKE-RELATED Genomic Order:  1224
Name:  ? Phvul.006G123000 Secondary Identifier:  ? PAC:37174203
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G123000 0.5kb upstream 0.5kb upstream 4331 true Chr06: 23161836-23166166 Phaseolus vulgaris
Phvul.006G123000 0.5kb upstream 0.5kb upstream 500 false Chr06: 23161836-23162335 Phaseolus vulgaris
Phvul.006G123000 0.5kb downstream 0.5kb downstream 4331 true Chr06: 23162336-23166666 Phaseolus vulgaris
Phvul.006G123000 0.5kb downstream 0.5kb downstream 500 false Chr06: 23166167-23166666 Phaseolus vulgaris
Phvul.006G123000 1.0kb upstream 1.0kb upstream 4831 true Chr06: 23161336-23166166 Phaseolus vulgaris
Phvul.006G123000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 23161336-23162335 Phaseolus vulgaris
Phvul.006G123000 1.0kb downstream 1.0kb downstream 4831 true Chr06: 23162336-23167166 Phaseolus vulgaris
Phvul.006G123000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 23166167-23167166 Phaseolus vulgaris
Phvul.006G123000 2.0kb upstream 2.0kb upstream 5831 true Chr06: 23160336-23166166 Phaseolus vulgaris
Phvul.006G123000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 23160336-23162335 Phaseolus vulgaris
Phvul.006G123000 2.0kb downstream 2.0kb downstream 5831 true Chr06: 23162336-23168166 Phaseolus vulgaris
Phvul.006G123000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 23166167-23168166 Phaseolus vulgaris
Phvul.006G123000 5.0kb upstream 5.0kb upstream 8831 true Chr06: 23157336-23166166 Phaseolus vulgaris
Phvul.006G123000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 23157336-23162335 Phaseolus vulgaris
Phvul.006G123000 5.0kb downstream 5.0kb downstream 8831 true Chr06: 23162336-23171166 Phaseolus vulgaris
Phvul.006G123000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 23166167-23171166 Phaseolus vulgaris
Phvul.006G123000 10.0kb upstream 10.0kb upstream 13831 true Chr06: 23152336-23166166 Phaseolus vulgaris
Phvul.006G123000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 23152336-23162335 Phaseolus vulgaris
Phvul.006G123000 10.0kb downstream 10.0kb downstream 13831 true Chr06: 23162336-23176166 Phaseolus vulgaris
Phvul.006G123000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 23166167-23176166 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307432 5265 Fabidae View MSA
124066971 5270 Rosid View MSA
123749077 5271 Pentapetalae View MSA
122793446 5272 Eudicot View MSA
122045659 5273 Angiosperm View MSA
121348303 5274 Embryophyte View MSA
123380810 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.79729 0.0 8.13799    
cufflinks 0.409285 0.0 1.47177 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.68731 0.0 7.86572    
cufflinks 1.67618 0.0 5.1885    
cufflinks 0.0150617 0.0 0.07262 Low Low
cufflinks 6.5443 0.0 17.509    
cufflinks 3.77725 0.0 10.5966    
cufflinks 14.1119 0.0 36.4906   High
cufflinks 0.249423 0.0 0.939555 Low  
cufflinks 2.1395 0.0 6.43367    

0 Strain