Gene : Phvul.010G165800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10366//PTHR10366:SF343 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED Genomic Order:  1670
Name:  ? Phvul.010G165800 Secondary Identifier:  ? PAC:37142847
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5064 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5086 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G165800 0.5kb upstream 0.5kb upstream 7417 true Chr10: 44233330-44240746 Phaseolus vulgaris
Phvul.010G165800 0.5kb upstream 0.5kb upstream 500 false Chr10: 44240247-44240746 Phaseolus vulgaris
Phvul.010G165800 0.5kb downstream 0.5kb downstream 7417 true Chr10: 44232830-44240246 Phaseolus vulgaris
Phvul.010G165800 0.5kb downstream 0.5kb downstream 500 false Chr10: 44232830-44233329 Phaseolus vulgaris
Phvul.010G165800 1.0kb upstream 1.0kb upstream 7917 true Chr10: 44233330-44241246 Phaseolus vulgaris
Phvul.010G165800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 44240247-44241246 Phaseolus vulgaris
Phvul.010G165800 1.0kb downstream 1.0kb downstream 7917 true Chr10: 44232330-44240246 Phaseolus vulgaris
Phvul.010G165800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 44232330-44233329 Phaseolus vulgaris
Phvul.010G165800 2.0kb upstream 2.0kb upstream 8917 true Chr10: 44233330-44242246 Phaseolus vulgaris
Phvul.010G165800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 44240247-44242246 Phaseolus vulgaris
Phvul.010G165800 2.0kb downstream 2.0kb downstream 8917 true Chr10: 44231330-44240246 Phaseolus vulgaris
Phvul.010G165800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 44231330-44233329 Phaseolus vulgaris
Phvul.010G165800 5.0kb upstream 5.0kb upstream 11917 true Chr10: 44233330-44245246 Phaseolus vulgaris
Phvul.010G165800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 44240247-44245246 Phaseolus vulgaris
Phvul.010G165800 5.0kb downstream 5.0kb downstream 11917 true Chr10: 44228330-44240246 Phaseolus vulgaris
Phvul.010G165800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 44228330-44233329 Phaseolus vulgaris
Phvul.010G165800 10.0kb upstream 10.0kb upstream 16917 true Chr10: 44233330-44250246 Phaseolus vulgaris
Phvul.010G165800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 44240247-44250246 Phaseolus vulgaris
Phvul.010G165800 10.0kb downstream 10.0kb downstream 16917 true Chr10: 44223330-44240246 Phaseolus vulgaris
Phvul.010G165800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 44223330-44233329 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306443 5265 Fabidae View MSA
124060991 5270 Rosid View MSA
123739581 5271 Pentapetalae View MSA
122792894 5272 Eudicot View MSA
122046159 5273 Angiosperm View MSA
121349944 5274 Embryophyte View MSA
123424676 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.4505 0.0 61.8457    
cufflinks 15.3992 0.0 49.299    
cufflinks 107.026 0.0 388.487 High High
cufflinks 14.2968 0.0 46.3453    
cufflinks 15.1637 0.0 48.8165    
cufflinks 34.0172 0.0 111.688 High  
cufflinks 2.87697 0.0 10.5964   Low
cufflinks 2.14188 0.0 8.48939   Low
cufflinks 4.17465 0.0 16.4115   Low
cufflinks 20.3295 0.0 64.9824    
cufflinks 15.532 0.0 49.8077    

0 Strain