Gene : Phvul.006G106700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR14190 - SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52 Genomic Order:  1059
Name:  ? Phvul.006G106700 Secondary Identifier:  ? PAC:37172236
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G106700 0.5kb upstream 0.5kb upstream 10298 true Chr06: 21601390-21611687 Phaseolus vulgaris
Phvul.006G106700 0.5kb upstream 0.5kb upstream 500 false Chr06: 21611188-21611687 Phaseolus vulgaris
Phvul.006G106700 0.5kb downstream 0.5kb downstream 10298 true Chr06: 21600890-21611187 Phaseolus vulgaris
Phvul.006G106700 0.5kb downstream 0.5kb downstream 500 false Chr06: 21600890-21601389 Phaseolus vulgaris
Phvul.006G106700 1.0kb upstream 1.0kb upstream 10798 true Chr06: 21601390-21612187 Phaseolus vulgaris
Phvul.006G106700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 21611188-21612187 Phaseolus vulgaris
Phvul.006G106700 1.0kb downstream 1.0kb downstream 10798 true Chr06: 21600390-21611187 Phaseolus vulgaris
Phvul.006G106700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 21600390-21601389 Phaseolus vulgaris
Phvul.006G106700 2.0kb upstream 2.0kb upstream 11798 true Chr06: 21601390-21613187 Phaseolus vulgaris
Phvul.006G106700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 21611188-21613187 Phaseolus vulgaris
Phvul.006G106700 2.0kb downstream 2.0kb downstream 11798 true Chr06: 21599390-21611187 Phaseolus vulgaris
Phvul.006G106700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 21599390-21601389 Phaseolus vulgaris
Phvul.006G106700 5.0kb upstream 5.0kb upstream 14798 true Chr06: 21601390-21616187 Phaseolus vulgaris
Phvul.006G106700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 21611188-21616187 Phaseolus vulgaris
Phvul.006G106700 5.0kb downstream 5.0kb downstream 14798 true Chr06: 21596390-21611187 Phaseolus vulgaris
Phvul.006G106700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 21596390-21601389 Phaseolus vulgaris
Phvul.006G106700 10.0kb upstream 10.0kb upstream 19798 true Chr06: 21601390-21621187 Phaseolus vulgaris
Phvul.006G106700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 21611188-21621187 Phaseolus vulgaris
Phvul.006G106700 10.0kb downstream 10.0kb downstream 19798 true Chr06: 21591390-21611187 Phaseolus vulgaris
Phvul.006G106700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 21591390-21601389 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305451 5265 Fabidae View MSA
124065275 5270 Rosid View MSA
123738224 5271 Pentapetalae View MSA
122792330 5272 Eudicot View MSA
122043794 5273 Angiosperm View MSA
121345189 5274 Embryophyte View MSA
123425999 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.62407 0.0 15.5647   Low
cufflinks 7.54348 0.0 20.4192    
cufflinks 13.2726 0.0 34.5596   High
cufflinks 7.20276 0.0 19.7313    
cufflinks 7.85238 0.0 21.3195    
cufflinks 12.359 0.0 32.3403   High
cufflinks 9.54654 0.0 25.4388    
cufflinks 10.6436 0.0 28.0224    
cufflinks 11.0169 0.0 29.1256    
cufflinks 8.22252 0.0 22.0909    
cufflinks 8.01218 0.0 21.6899    

0 Strain