Gene : Phvul.006G104900 P. vulgaris v2.1
Genomic Order:  1042 Name:  ? Phvul.006G104900
Secondary Identifier:  ? PAC:37173554
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G104900 0.5kb upstream 0.5kb upstream 2862 true Chr06: 21414375-21417236 Phaseolus vulgaris
Phvul.006G104900 0.5kb upstream 0.5kb upstream 500 false Chr06: 21416737-21417236 Phaseolus vulgaris
Phvul.006G104900 0.5kb downstream 0.5kb downstream 2862 true Chr06: 21413875-21416736 Phaseolus vulgaris
Phvul.006G104900 0.5kb downstream 0.5kb downstream 500 false Chr06: 21413875-21414374 Phaseolus vulgaris
Phvul.006G104900 1.0kb upstream 1.0kb upstream 3362 true Chr06: 21414375-21417736 Phaseolus vulgaris
Phvul.006G104900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 21416737-21417736 Phaseolus vulgaris
Phvul.006G104900 1.0kb downstream 1.0kb downstream 3362 true Chr06: 21413375-21416736 Phaseolus vulgaris
Phvul.006G104900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 21413375-21414374 Phaseolus vulgaris
Phvul.006G104900 2.0kb upstream 2.0kb upstream 4362 true Chr06: 21414375-21418736 Phaseolus vulgaris
Phvul.006G104900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 21416737-21418736 Phaseolus vulgaris
Phvul.006G104900 2.0kb downstream 2.0kb downstream 4362 true Chr06: 21412375-21416736 Phaseolus vulgaris
Phvul.006G104900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 21412375-21414374 Phaseolus vulgaris
Phvul.006G104900 5.0kb upstream 5.0kb upstream 7362 true Chr06: 21414375-21421736 Phaseolus vulgaris
Phvul.006G104900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 21416737-21421736 Phaseolus vulgaris
Phvul.006G104900 5.0kb downstream 5.0kb downstream 7362 true Chr06: 21409375-21416736 Phaseolus vulgaris
Phvul.006G104900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 21409375-21414374 Phaseolus vulgaris
Phvul.006G104900 10.0kb upstream 10.0kb upstream 12362 true Chr06: 21414375-21426736 Phaseolus vulgaris
Phvul.006G104900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 21416737-21426736 Phaseolus vulgaris
Phvul.006G104900 10.0kb downstream 10.0kb downstream 12362 true Chr06: 21404375-21416736 Phaseolus vulgaris
Phvul.006G104900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 21404375-21414374 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312325 5265 Fabidae View MSA
124072121 5270 Rosid View MSA
123753133 5271 Pentapetalae View MSA
122794292 5272 Eudicot View MSA
122045555 5273 Angiosperm View MSA
121349890 5274 Embryophyte View MSA
123381485 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.21474 0.0 3.97281    
cufflinks 5.77291 0.0 15.966   High
cufflinks 0.672915 0.0 2.34707    
cufflinks 0.686017 0.0 2.40915    
cufflinks 1.88083 0.0 5.92757    
cufflinks 3.16527 0.0 9.27577    
cufflinks 2.31706 0.0 6.99825    
cufflinks 1.56403 0.0 4.94347    
cufflinks 3.22546 0.0 9.38463    
cufflinks 0.126035 0.0 0.509208 Low Low
cufflinks 3.13555 0.0 9.24323    

0 Strain