Gene : Phvul.010G165100 P. vulgaris v2.1
Defline:  (1 of 8) K15813 - beta-amyrin synthase (LUP4) Genomic Order:  1663
Name:  ? Phvul.010G165100 Secondary Identifier:  ? PAC:37142120
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5203 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G165100 0.5kb upstream 0.5kb upstream 6356 true Chr10: 44186662-44193017 Phaseolus vulgaris
Phvul.010G165100 0.5kb upstream 0.5kb upstream 500 false Chr10: 44192518-44193017 Phaseolus vulgaris
Phvul.010G165100 0.5kb downstream 0.5kb downstream 6356 true Chr10: 44186162-44192517 Phaseolus vulgaris
Phvul.010G165100 0.5kb downstream 0.5kb downstream 500 false Chr10: 44186162-44186661 Phaseolus vulgaris
Phvul.010G165100 1.0kb upstream 1.0kb upstream 6856 true Chr10: 44186662-44193517 Phaseolus vulgaris
Phvul.010G165100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 44192518-44193517 Phaseolus vulgaris
Phvul.010G165100 1.0kb downstream 1.0kb downstream 6856 true Chr10: 44185662-44192517 Phaseolus vulgaris
Phvul.010G165100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 44185662-44186661 Phaseolus vulgaris
Phvul.010G165100 2.0kb upstream 2.0kb upstream 7856 true Chr10: 44186662-44194517 Phaseolus vulgaris
Phvul.010G165100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 44192518-44194517 Phaseolus vulgaris
Phvul.010G165100 2.0kb downstream 2.0kb downstream 7856 true Chr10: 44184662-44192517 Phaseolus vulgaris
Phvul.010G165100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 44184662-44186661 Phaseolus vulgaris
Phvul.010G165100 5.0kb upstream 5.0kb upstream 10856 true Chr10: 44186662-44197517 Phaseolus vulgaris
Phvul.010G165100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 44192518-44197517 Phaseolus vulgaris
Phvul.010G165100 5.0kb downstream 5.0kb downstream 10856 true Chr10: 44181662-44192517 Phaseolus vulgaris
Phvul.010G165100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 44181662-44186661 Phaseolus vulgaris
Phvul.010G165100 10.0kb upstream 10.0kb upstream 15856 true Chr10: 44186662-44202517 Phaseolus vulgaris
Phvul.010G165100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 44192518-44202517 Phaseolus vulgaris
Phvul.010G165100 10.0kb downstream 10.0kb downstream 15856 true Chr10: 44176662-44192517 Phaseolus vulgaris
Phvul.010G165100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 44176662-44186661 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791741 5273 Angiosperm View MSA
122308588 5265 Fabidae View MSA
124062069 5270 Rosid View MSA
123738080 5271 Pentapetalae View MSA
122788516 5272 Eudicot View MSA
121063041 5274 Embryophyte View MSA
123102827 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.18911 0.0 16.5786    
cufflinks 17.6676 0.0 45.728    
cufflinks 1.57255 0.0 4.81893   Low
cufflinks 17.8112 0.0 46.0535    
cufflinks 16.387 0.0 42.3591    
cufflinks 10.076 0.0 26.2105    
cufflinks 48.7546 0.0 134.705 High High
cufflinks 32.8563 0.0 87.82 High  
cufflinks 18.612 0.0 48.2112    
cufflinks 1.99262 0.0 5.9604   Low
cufflinks 18.8746 0.0 48.8745    

0 Strain